Multi-parent populations in crops: a toolbox integrating genomics and genetic mapping with breeding

MF Scott, O Ladejobi, S Amer, AR Bentley, J Biernaskie… - Heredity, 2020 - nature.com
Crop populations derived from experimental crosses enable the genetic dissection of
complex traits and support modern plant breeding. Among these, multi-parent populations …

Harnessing the power of RADseq for ecological and evolutionary genomics

KR Andrews, JM Good, MR Miller, G Luikart… - Nature Reviews …, 2016 - nature.com
High-throughput techniques based on restriction site-associated DNA sequencing (RADseq)
are enabling the low-cost discovery and genotyping of thousands of genetic markers for any …

Genebank genomics highlights the diversity of a global barley collection

SG Milner, M Jost, S Taketa, ER Mazón… - Nature …, 2019 - nature.com
Genebanks hold comprehensive collections of cultivars, landraces and crop wild relatives of
all major food crops, but their detailed characterization has so far been limited to sparse core …

Genotyping‐by‐sequencing approaches to characterize crop genomes: choosing the right tool for the right application

A Scheben, J Batley, D Edwards - Plant biotechnology journal, 2017 - Wiley Online Library
In the last decade, the revolution in sequencing technologies has deeply impacted crop
genotyping practice. New methods allowing rapid, high‐throughput genotyping of entire …

A study of allelic diversity underlying flowering-time adaptation in maize landraces

JA Romero Navarro, M Willcox, J Burgueño, C Romay… - Nature …, 2017 - nature.com
Landraces (traditional varieties) of domesticated species preserve useful genetic variation,
yet they remain untapped due to the genetic linkage between the few useful alleles and …

Dysregulation of expression correlates with rare-allele burden and fitness loss in maize

KAG Kremling, SY Chen, MH Su, NK Lepak… - Nature, 2018 - nature.com
Here we report a multi-tissue gene expression resource that represents the genotypic and
phenotypic diversity of modern inbred maize, and includes transcriptomes in an average of …

[HTML][HTML] Genetic mapping of quantitative trait loci in crops

Y Xu, P Li, Z Yang, C Xu - The Crop Journal, 2017 - Elsevier
Dissecting the genetic architecture of complex traits is an ongoing challenge for geneticists.
Two complementary approaches for genetic mapping, linkage mapping and association …

Genome-wide association study of 12 agronomic traits in peach

KE Cao, Z Zhou, QI Wang, J Guo, P Zhao, G Zhu… - Nature …, 2016 - nature.com
Peach (Prunus persica L.) is a highly valuable crop species and is recognized by molecular
researchers as a model fruit for the Rosaceae family. Using whole-genome sequencing data …

[HTML][HTML] Tackling the climate, biodiversity and pollution emergencies by making peace with nature 50 years after the Stockholm Conference

IA Baste, RT Watson - Global Environmental Change, 2022 - Elsevier
Today's increasingly unequal and resource intensive development model degrades and
surpasses Earth's finite capacity to sustain human well-being. Society must restore this …

Applications of genotyping-by-sequencing (GBS) in maize genetics and breeding

N Wang, Y Yuan, H Wang, D Yu, Y Liu, A Zhang… - Scientific reports, 2020 - nature.com
Abstract Genotyping-by-Sequencing (GBS) is a low-cost, high-throughput genotyping
method that relies on restriction enzymes to reduce genome complexity. GBS is being widely …