Natural variation in plant pluripotency and regeneration

R Lardon, D Geelen - Plants, 2020 - mdpi.com
Plant regeneration is essential for survival upon wounding and is, hence, considered to be a
strong natural selective trait. The capacity of plant tissues to regenerate in vitro, however …

Linking genes with ecological strategies in Arabidopsis thaliana

M Takou, B Wieters, S Kopriva… - Journal of …, 2019 - academic.oup.com
Arabidopsis thaliana is the most prominent model system in plant molecular biology and
genetics. Although its ecology was initially neglected, collections of various genotypes …

Pan-European study of genotypes and phenotypes in the Arabidopsis relative Cardamine hirsuta reveals how adaptation, demography, and development shape …

L Baumgarten, B Pieper, B Song, S Mane, J Lempe… - PLoS …, 2023 - journals.plos.org
We study natural DNA polymorphisms and associated phenotypes in the Arabidopsis
relative Cardamine hirsuta. We observed strong genetic differentiation among several …

The genetic framework of shoot regeneration in Arabidopsis comprises master regulators and conditional fine-tuning factors

R Lardon, E Wijnker, J Keurentjes, D Geelen - Communications biology, 2020 - nature.com
Clonal propagation and genetic engineering of plants requires regeneration, but many
species are recalcitrant and there is large variability in explant responses. Here, we perform …

Enhanced recombination empowers the detection and mapping of Quantitative Trait Loci

L Capilla-Pérez, V Solier, E Gilbault, Q Lian… - Communications …, 2024 - nature.com
Modern plant breeding, such as genomic selection and gene editing, is based on the
knowledge of the genetic architecture of desired traits. Quantitative trait loci (QTL) analysis …

Natural variation in response to combined water and nitrogen deficiencies in Arabidopsis

Z Xue, M Ferrand, E Gilbault, O Zurfluh… - The Plant …, 2024 - academic.oup.com
Understanding plant responses to individual stresses does not mean that we understand
real-world situations, where stresses usually combine and interact. These interactions arise …

Natural variation at FLM splicing has pleiotropic effects modulating ecological strategies in Arabidopsis thaliana

M Hanemian, F Vasseur, E Marchadier… - Nature …, 2020 - nature.com
Investigating the evolution of complex phenotypes and the underlying molecular bases of
their variation is critical to understand how organisms adapt to their environment. Applying …

Locally adaptive temperature response of vegetative growth in Arabidopsis thaliana

P Clauw, E Kerdaffrec, J Gunis, I Reichardt-Gomez… - Elife, 2022 - elifesciences.org
We investigated early vegetative growth of natural Arabidopsis thaliana accessions in cold,
nonfreezing temperatures, similar to temperatures these plants naturally encounter in fall at …

Deciphering Genetic Architecture of Adventitious Root and Related Shoot Traits in Populus Using QTL Mapping and RNA-Seq Data

P Sun, H Jia, Y Zhang, J Li, M Lu, J Hu - International Journal of …, 2019 - mdpi.com
Understanding the genetic architecture of adventitious root and related shoot traits will
facilitate the cultivation of superior genotypes. In this study, we measured 12 adventitious …

Natural variation in Arabidopsis shoot branching plasticity in response to nitrate supply affects fitness

M de Jong, H Tavares, RK Pasam, R Butler… - PLoS …, 2019 - journals.plos.org
The capacity of organisms to tune their development in response to environmental cues is
pervasive in nature. This phenotypic plasticity is particularly striking in plants, enabled by …