2D electrophoresis-based expression proteomics: a microbiologist's perspective

I Sá-Correia, MC Teixeira - Expert Review of Proteomics, 2010 - Taylor & Francis
Quantitative proteomics based on 2D electrophoresis (2-DE) coupled with peptide mass
fingerprinting is still one of the most widely used quantitative proteomics approaches in …

Variations on a theme: changes to electrophoretic separations that can make a difference

T Rabilloud - Journal of proteomics, 2010 - Elsevier
Electrophoretic separations of proteins are widely used in proteomic analyses, and rely
heavily on SDS electrophoresis. This mode of separation is almost exclusively used when a …

Measuring redox changes to mitochondrial protein thiols with redox difference gel electrophoresis (Redox‐Dige)

TR Hurd, AM James, KS Lilley, MP Murphy - Methods in enzymology, 2009 - Elsevier
Low levels of reactive oxygen and nitrogen species (ROS and RNS) produced by the
mitochondrial respiratory chain and ROS and RNS from other sources act as redox signals …

Supported bilayer electrophoresis under controlled buffer conditions

CF Monson, HP Pace, C Liu, PS Cremer - Analytical chemistry, 2011 - ACS Publications
A pH controlled flow cell device was constructed to allow electrophoretic movement of
charged lipids and membrane associated proteins in supported phospholipid bilayers. The …

Myelin proteome analysis: methods and implications for the myelin cytoskeleton

O Jahn, S Tenzer, N Bartsch, J Patzig… - The Cytoskeleton: Imaging …, 2013 - Springer
Myelin, the multilayered membrane that enwraps and insulates neuronal axons for fast
signal propagation, is a plasma membrane specialization of oligodendrocytes and Schwann …

Identification of autoantigens in body fluids by combining pull-downs and organic precipitations of intact immune complexes with quantitative label-free mass …

J Merl, CA Deeg, ME Swadzba, M Ueffing… - Journal of proteome …, 2013 - ACS Publications
Most autoimmune diseases are multifactorial diseases and are caused by the
immunological reaction against a number of autoantigens. Key for understanding …

Proteomics of regulated secretory organelles

Y Brunner, D Schvartz, Y Couté… - Mass spectrometry …, 2009 - Wiley Online Library
Regulated secretory organelles are important subcellular structures of living cells that allow
the release in the extracellular space of crucial compounds, such as hormones and …

Proteome and metabolome alterations in heart and liver indicate compromised energy production during sepsis

J Hinkelbein, A Kalenka, C Schubert… - Protein and Peptide …, 2010 - ingentaconnect.com
During the course of sepsis, heart and liver dysfunction occurs in 20-30% of patients. Both
septic cardiomyopathy and septic liver dysfunction have a high mortality and the underlying …

AQP1 expression analysis in human diseases: implications for proteomic characterization

F Magni, C Chinello, F Raimondo… - Expert Review of …, 2008 - Taylor & Francis
Aquaporin (AQP) 1 belongs to a ubiquitous family of water channel proteins characterized
by sequence similarity and the presence of two NPA (Asp–Pro–Ala) motifs existing in almost …

Multidimensional protein identification technology for direct-tissue proteomics of heart

D Di Silvestre, F Brambilla, PL Mauri - Heart Proteomics: Methods and …, 2013 - Springer
Multidimensional protein identification technology (MudPIT) is an invaluable approach to
identify proteins at large-scale level. Here, we describe a procedure of investigation to …