Feature fusion-based food protein subcellular prediction for drug composition
The structure and function of dietary proteins, as well as their subcellular prediction, are
critical for designing and developing new drug compositions and understanding the …
critical for designing and developing new drug compositions and understanding the …
CEGSO: boosting essential proteins prediction by integrating protein complex, gene expression, gene ontology, subcellular localization and orthology information
W Zhang, X Xue, C Xie, Y Li, J Liu, H Chen… - Interdisciplinary Sciences …, 2021 - Springer
Essential proteins are assumed to be an indispensable element in sustaining normal
physiological function and crucial to drug design and disease diagnosis. The discovery of …
physiological function and crucial to drug design and disease diagnosis. The discovery of …
Temporal-spatial analysis of the essentiality of hub proteins in protein-protein interaction networks
Hubs are generally defined as nodes with a high degree centrality, and they are important
for maintaining the stability of complex networks. Previous studies have shown that hub …
for maintaining the stability of complex networks. Previous studies have shown that hub …
[HTML][HTML] Identification of essential proteins based on edge features and the fusion of multiple-source biological information
P Liu, C Liu, Y Mao, J Guo, F Liu, W Cai, F Zhao - BMC bioinformatics, 2023 - Springer
Background A major current focus in the analysis of protein–protein interaction (PPI) data is
how to identify essential proteins. As massive PPI data are available, this warrants the …
how to identify essential proteins. As massive PPI data are available, this warrants the …
[HTML][HTML] Comparative analysis of gene ontology-based semantic similarity measurements for the application of identifying essential proteins
X Xue, W Zhang, A Fan - Plos one, 2023 - journals.plos.org
Identifying key proteins from protein-protein interaction (PPI) networks is one of the most
fundamental and important tasks for computational biologists. However, the protein …
fundamental and important tasks for computational biologists. However, the protein …
A node ranking method based on multiple layers for dynamic protein interaction networks
Constructing dynamic protein interaction networks (DPIN) is a common way to improve
identification accuracy of essential proteins. The existing methods usually aggregate DPIN …
identification accuracy of essential proteins. The existing methods usually aggregate DPIN …
[HTML][HTML] Method for essential protein prediction based on a novel weighted protein-domain interaction network
Z Meng, L Kuang, Z Chen, Z Zhang, Y Tan, X Li… - Frontiers in …, 2021 - frontiersin.org
In recent years a number of calculative models based on protein-protein interaction (PPI)
networks have been proposed successively. However, due to false positives, false …
networks have been proposed successively. However, due to false positives, false …
[HTML][HTML] Method for identifying essential proteins by key features of proteins in a novel protein-domain network
X He, L Kuang, Z Chen, Y Tan, L Wang - Frontiers in Genetics, 2021 - frontiersin.org
In recent years, due to low accuracy and high costs of traditional biological experiments,
more and more computational models have been proposed successively to infer potential …
more and more computational models have been proposed successively to infer potential …
[HTML][HTML] A seed expansion-based method to identify essential proteins by integrating protein–protein interaction sub-networks and multiple biological characteristics
H Zhao, G Liu, X Cao - BMC bioinformatics, 2023 - Springer
Background The identification of essential proteins is of great significance in biology and
pathology. However, protein–protein interaction (PPI) data obtained through high …
pathology. However, protein–protein interaction (PPI) data obtained through high …
Essential proteins discovery based on dominance relationship and neighborhood similarity centrality
G Li, X Luo, Z Hu, J Wu, W Peng, J Liu… - Health Information Science …, 2023 - Springer
Essential proteins play a vital role in development and reproduction of cells. The
identification of essential proteins helps to understand the basic survival of cells. Due to time …
identification of essential proteins helps to understand the basic survival of cells. Due to time …