CTCF as a regulator of alternative splicing: new tricks for an old player
Three decades of research have established the CCCTC-binding factor (CTCF) as a
ubiquitously expressed chromatin organizing factor and master regulator of gene …
ubiquitously expressed chromatin organizing factor and master regulator of gene …
MicroRNA29a regulates IL-33-mediated tissue remodelling in tendon disease
NL Millar, DS Gilchrist, M Akbar, JH Reilly… - Nature …, 2015 - nature.com
MicroRNA (miRNA) has the potential for cross-regulation and functional integration of
discrete biological processes during complex physiological events. Utilizing the common …
discrete biological processes during complex physiological events. Utilizing the common …
Measuring the tail: Methods for poly (A) tail profiling
A Brouze, PS Krawczyk… - Wiley Interdisciplinary …, 2023 - Wiley Online Library
Abstract The 3′‐end poly (A) tail is an important and potent feature of most mRNA
molecules that affects mRNA fate and translation efficiency. Polyadenylation is a …
molecules that affects mRNA fate and translation efficiency. Polyadenylation is a …
POINT technology illuminates the processing of polymerase-associated intact nascent transcripts
Mammalian chromatin is the site of both RNA polymerase II (Pol II) transcription and coupled
RNA processing. However, molecular details of such co-transcriptional mechanisms remain …
RNA processing. However, molecular details of such co-transcriptional mechanisms remain …
[HTML][HTML] DNA methylation regulates alternative polyadenylation via CTCF and the cohesin complex
Dysregulation of DNA methylation and mRNA alternative cleavage and polyadenylation
(APA) are both prevalent in cancer and have been studied as independent processes. We …
(APA) are both prevalent in cancer and have been studied as independent processes. We …
Transposable elements drive rapid phenotypic variation in Capsella rubella
XM Niu, YC Xu, ZW Li, YT Bian… - Proceedings of the …, 2019 - National Acad Sciences
Rapid phenotypic changes in traits of adaptive significance are crucial for organisms to
thrive in changing environments. How such phenotypic variation is achieved rapidly, despite …
thrive in changing environments. How such phenotypic variation is achieved rapidly, despite …
Transcriptome-wide analyses of CstF64–RNA interactions in global regulation of mRNA alternative polyadenylation
C Yao, J Biesinger, J Wan, L Weng… - Proceedings of the …, 2012 - National Acad Sciences
Cleavage stimulation factor 64 kDa (CstF64) is an essential pre-mRNA 3′ processing factor
and an important regulator of alternative polyadenylation (APA). Here we characterized …
and an important regulator of alternative polyadenylation (APA). Here we characterized …
Alternative polyadenylation: new insights from global analyses
Y Shi - Rna, 2012 - rnajournal.cshlp.org
Recent studies have revealed widespread mRNA alternative polyadenylation (APA) in
eukaryotes and its dynamic spatial and temporal regulation. APA not only generates …
eukaryotes and its dynamic spatial and temporal regulation. APA not only generates …
Fip1 regulates mRNA alternative polyadenylation to promote stem cell self‐renewal
B Lackford, C Yao, GM Charles, L Weng… - The EMBO …, 2014 - embopress.org
Abstract mRNA alternative polyadenylation (APA) plays a critical role in post‐transcriptional
gene control and is highly regulated during development and disease. However, the …
gene control and is highly regulated during development and disease. However, the …
[HTML][HTML] Disengaging polymerase: terminating RNA polymerase II transcription in budding yeast
HE Mischo, NJ Proudfoot - Biochimica et Biophysica Acta (BBA)-Gene …, 2013 - Elsevier
Termination of transcription by RNA polymerase II requires two distinct processes: The
formation of a defined 3′ end of the transcribed RNA, as well as the disengagement of RNA …
formation of a defined 3′ end of the transcribed RNA, as well as the disengagement of RNA …