[HTML][HTML] Microbiological and molecular diagnosis of mucormycosis: from old to new

N Lackner, W Posch, C Lass-Flörl - Microorganisms, 2021 - mdpi.com
Members of the order Mucorales may cause severe invasive fungal infections
(mucormycosis) in immune-compromised and otherwise ill patients. Diagnosis of Mucorales …

[HTML][HTML] The potential role of clinical metagenomics in infectious diseases: therapeutic perspectives

C d'Humières, M Salmona, S Dellière, S Leo… - Drugs, 2021 - Springer
Clinical metagenomics (CMg) is the process of sequencing nucleic acid of clinical samples
to obtain clinically relevant information such as the identification of microorganisms and their …

[HTML][HTML] Cyanobacterial Algal bloom monitoring: molecular methods and technologies for freshwater Ecosystems

F Saleem, JL Jiang, R Atrache, A Paschos, TA Edge… - Microorganisms, 2023 - mdpi.com
Cyanobacteria (blue-green algae) can accumulate to form harmful algal blooms (HABs) on
the surface of freshwater ecosystems under eutrophic conditions. Extensive HAB events can …

Universal digital high-resolution melting for the detection of pulmonary mold infections

T Goshia, A Aralar, N Wiederhold… - Journal of Clinical …, 2024 - Am Soc Microbiol
Invasive mold infections (IMIs) are associated with high morbidity, particularly in
immunocompromised patients, with mortality rates between 40% and 80%. Early initiation of …

Evaluation of different DNA extraction methods based on steel‐bullet beating for molecular diagnosis of onychomycosis

M Motamedi, A Amini, S Yazdanpanah… - Journal of Clinical …, 2022 - Wiley Online Library
Background Considering increased trends toward molecular methods for
detection/identification of fungi causing onychomycosis, the aim of this study is comparison …

[HTML][HTML] Streamlined instrument-free lysis for the detection of Candida auris

M Jin, AY Trick, M Totten, P Lee, SX Zhang… - Scientific reports, 2023 - nature.com
The continued spread of Candida auris in healthcare facilities has increased the demand for
widely available screening to aid in containment and inform treatment options. Current …

Optimizing nanopore sequencing for rapid detection of microbial species and antimicrobial resistance in patients at risk of surgical site infections

E Whittle, JA Yonkus, P Jeraldo, R Alva-Ruiz, H Nelson… - Msphere, 2022 - Am Soc Microbiol
Surgical site infections (SSI) are a significant burden to patients and health care systems.
We evaluated the use of Nanopore sequencing (NS) to rapidly detect microbial species and …

[HTML][HTML] Metagenomic next-generation sequencing for the microbiological diagnosis of abdominal sepsis patients

D Li, W Gai, J Zhang, W Cheng, N Cui… - Frontiers in …, 2022 - frontiersin.org
Objectives For patients with intra-abdominal infection (IAI), the rapid and accurate
identification of pathogens remains a challenge. Metagenomic next-generation sequencing …

Assessment of DNA extraction methods for human gut mycobiome analysis

P Rintarhat, YJ Cho, H Koh, S Park… - Royal Society …, 2024 - royalsocietypublishing.org
The gut mycobiome plays an important role in the health and disease of the human gut, but
its exact function is still under investigation. While there is a wealth of information available …

[HTML][HTML] Evaluation of 11 DNA automated extraction protocols for the detection of the 5 mains Candida species from artificially spiked blood

E Menu, J Landier, E Prudent, S Ranque, C L'ollivier - Journal of Fungi, 2021 - mdpi.com
The molecular detection of Candida plays an important role in the diagnosis of candidaemia,
a major cause of morbidity and mortality. The sensitivity of this diagnosis is partly related to …