Unveiling bifidobacterial biogeography across the mammalian branch of the tree of life

C Milani, M Mangifesta, L Mancabelli, GA Lugli… - The ISME …, 2017 - academic.oup.com
Internally transcribed spacer (ITS) rRNA profiling is a novel tool for detailed analysis of
microbial populations at low taxonomic ranks. Here we exploited this approach to explore …

[HTML][HTML] Review on Bifidobacterium bifidum BGN4: Functionality and Nutraceutical Applications as a Probiotic Microorganism

S Ku, MS Park, GE Ji, HJ You - International journal of molecular sciences, 2016 - mdpi.com
Bifidobacterium bifidum BGN4 is a probiotic strain that has been used as a major ingredient
to produce nutraceutical products and as a dairy starter since 2000. The various bio …

[HTML][HTML] The bifidogenic effect revisited—ecology and health perspectives of bifidobacterial colonization in early life

H Kumar, MC Collado, H Wopereis, S Salminen, J Knol… - Microorganisms, 2020 - mdpi.com
Extensive microbial colonization of the infant gastrointestinal tract starts after parturition.
There are several parallel mechanisms by which early life microbiome acquisition may …

[HTML][HTML] Beyond 16S rRNA community profiling: intra-species diversity in the gut microbiota

KM Ellegaard, P Engel - Frontiers in microbiology, 2016 - frontiersin.org
Interactions with microbes affect many aspects of animal biology, including immune system
development, nutrition and health. In vertebrates, the gut microbiota is dominated by a small …

Milk glycans and their interaction with the infant-gut microbiota

N Kirmiz, RC Robinson, IM Shah… - Annual Review of …, 2018 - annualreviews.org
Human milk is a unique and complex fluid that provides infant nutrition and delivers an array
of bioactive molecules that serve various functions. Glycans, abundant in milk, can be found …

Prevalence of antibiotic resistance genes among human gut-derived bifidobacteria

S Duranti, GA Lugli, L Mancabelli… - Applied and …, 2017 - Am Soc Microbiol
The microbiota of the human gastrointestinal tract (GIT) may regularly be exposed to
antibiotics, which are used to prevent and treat infectious diseases caused by bacteria and …

MEGAnnotator: a user-friendly pipeline for microbial genomes assembly and annotation

GA Lugli, C Milani, L Mancabelli… - FEMS microbiology …, 2016 - academic.oup.com
Genome annotation is one of the key actions that must be undertaken in order to decipher
the genetic blueprint of organisms. Thus, a correct and reliable annotation is essential in …

Gut microbial utilization of xylan and its implication in gut homeostasis and metabolic response

B Zhang, Y Zhong, D Dong, Z Zheng, J Hu - Carbohydrate polymers, 2022 - Elsevier
Xylan as the second most abundant indigestible carbohydrate found in nature attracts great
interests of researchers, nutritionist and consumers due to its various health benefits …

[HTML][HTML] Comparative genomic and phylogenomic analyses of the Bifidobacteriaceae family

GA Lugli, C Milani, F Turroni, S Duranti, L Mancabelli… - BMC genomics, 2017 - Springer
Abstract Background Members of the Bifidobacteriaceae family represent both dominant
microbial groups that colonize the gut of various animals, especially during the suckling …

Investigation of the evolutionary development of the genus Bifidobacterium by comparative genomics

GA Lugli, C Milani, F Turroni, S Duranti… - Applied and …, 2014 - Am Soc Microbiol
The Bifidobacterium genus currently encompasses 48 recognized taxa, which have been
isolated from different ecosystems. However, the current phylogeny of bifidobacteria is …