'Evolutionary poker': an agent‐based model of interactome emergence and epistasis tested against Lenski's long‐term E. coli experiments

RS Root‐Bernstein, MI Bernstein - The Journal of Physiology, 2024 - Wiley Online Library
A simple agent‐based model is presented that produces results matching the experimental
data found by Lenski's group for≤ 50,000 generations of Escherichia coli bacteria under …

Evolutionary Physiology and Genomics in the Highly Adaptable Killifish (Fundulus heteroc

DL Crawford - Comprehensive Physiology, 2020 - par.nsf.gov
By investigating evolutionary adaptations that change physiological functions, we can
enhance our understanding of how organisms work, the importance of physiological traits …

Genome-wide evolutionary response of European oaks during the Anthropocene

D Saleh, J Chen, JC Leplé, T Leroy, L Truffaut… - Evolution …, 2022 - academic.oup.com
The pace of tree microevolution during Anthropocene warming is largely unknown. We used
a retrospective approach to monitor genomic changes in oak trees since the Little Ice Age …

Fungal heavy metal adaptation through single nucleotide polymorphisms and copy‐number variation

AL Bazzicalupo, J Ruytinx, YH Ke, L Coninx… - Molecular …, 2020 - Wiley Online Library
Human‐altered environments can shape the evolution of organisms. Fungi are no
exception, although little is known about how they withstand anthropogenic pollution. Here …

Trans-acting genotypes associated with mRNA expression affect metabolic and thermal tolerance traits

MK Drown, MF Oleksiak… - Genome biology and …, 2023 - academic.oup.com
Evolutionary processes driving physiological trait variation depend on the underlying
genomic mechanisms. Evolution of these mechanisms depends on the genetic complexity …

Interindividual plasticity in metabolic and thermal tolerance traits from populations subjected to recent anthropogenic heating

MK Drown, AN DeLiberto… - Royal Society …, 2021 - royalsocietypublishing.org
To better understand temperature's role in the interaction between local evolutionary
adaptation and physiological plasticity, we investigated acclimation effects on metabolic …

Polygenic adaptation and negative selection across traits, years and environments in a long‐lived plant species (Pinus pinaster Ait., Pinaceae)

M de Miguel, I Rodríguez‐Quilón, M Heuertz… - Molecular …, 2022 - Wiley Online Library
A decade of genetic association studies in multiple organisms suggests that most complex
traits are polygenic; that is, they have a genetic architecture determined by numerous loci …

Beyond hybridization: the genetic impacts of nonreproductive ecological interactions of salmon aquaculture on wild populations

IR Bradbury, I Burgetz, MW Coulson… - Aquaculture …, 2020 - int-res.com
Cultured Atlantic salmon Salmo salar are of international socioeconomic value, and the
process of domestication has resulted in significant behavioural, morphological, and allelic …

Transcriptomic analysis provides insights into molecular mechanisms of thermal physiology

MK Drown, DL Crawford, MF Oleksiak - BMC genomics, 2022 - Springer
Physiological trait variation underlies health, responses to global climate change, and
ecological performance. Yet, most physiological traits are complex, and we have little …

Genome‐wide diversity and habitat underlie fine‐scale phenotypic differentiation in the rainbow darter (Etheostoma caeruleum)

DR Oliveira, BN Reid… - Evolutionary Applications, 2021 - Wiley Online Library
Adaptation to environmental change requires that populations harbor the necessary genetic
variation to respond to selection. However, dispersal‐limited species with fragmented …