Transcriptome and metabolite profiling show that APETALA2a is a major regulator of tomato fruit ripening
Fruit ripening in tomato (Solanum lycopersicum) requires the coordination of both
developmental cues as well as the plant hormone ethylene. Although the role of ethylene in …
developmental cues as well as the plant hormone ethylene. Although the role of ethylene in …
Immobilization of laccase onto chitosan beads to enhance its capability to degrade synthetic dyes
F Zheng, BK Cui, XJ Wu, G Meng, HX Liu… - International …, 2016 - Elsevier
Loss in activity and denaturation remain key challenges to the potential use of laccase in
industrial applications. One of the most important aims of enzyme technology is to enhance …
industrial applications. One of the most important aims of enzyme technology is to enhance …
Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom
Diatoms outcompete other phytoplankton for nitrate, yet little is known about the
mechanisms underpinning this ability. Genomes and genome-enabled studies have shown …
mechanisms underpinning this ability. Genomes and genome-enabled studies have shown …
TagFinder for the quantitative analysis of gas chromatography—mass spectrometry (GC-MS)-based metabolite profiling experiments
A Luedemann, K Strassburg, A Erban, J Kopka - Bioinformatics, 2008 - academic.oup.com
Abstract Motivation: Typical GC-MS-based metabolite profiling experiments may comprise
hundreds of chromatogram files, which each contain up to 1000 mass spectral tags (MSTs) …
hundreds of chromatogram files, which each contain up to 1000 mass spectral tags (MSTs) …
Plant and microbial sciences as key drivers in the development of metabolomics research
A Aharoni, R Goodacre… - Proceedings of the …, 2023 - National Acad Sciences
This year marks the 25th anniversary of the coinage of the term metabolome [SG Oliver et
al., Trends Biotech. 16, 373–378 (1998)]. As the field rapidly advances, it is important to take …
al., Trends Biotech. 16, 373–378 (1998)]. As the field rapidly advances, it is important to take …
A liquid chromatography-mass spectrometry-based metabolome database for tomato
For the description of the metabolome of an organism, the development of common
metabolite databases is of utmost importance. Here we present the Metabolome Tomato …
metabolite databases is of utmost importance. Here we present the Metabolome Tomato …
Plant metabolomics: from holistic hope, to hype, to hot topic
RD Hall - New phytologist, 2006 - Wiley Online Library
In a short time, plant metabolomics has gone from being just an ambitious concept to being
a rapidly growing, valuable technology applied in the stride to gain a more global picture of …
a rapidly growing, valuable technology applied in the stride to gain a more global picture of …
Metabolic footprinting and systems biology: the medium is the message
One element of classical systems analysis treats a system as a black or grey box, the inner
structure and behaviour of which can be analysed and modelled by varying an internal or …
structure and behaviour of which can be analysed and modelled by varying an internal or …
Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation
Marine primary productivity is iron (Fe)-limited in vast regions of the contemporary oceans,
most notably the high nutrient low chlorophyll (HNLC) regions. Diatoms often form large …
most notably the high nutrient low chlorophyll (HNLC) regions. Diatoms often form large …
Quantitative metabolomics based on gas chromatography mass spectrometry: status and perspectives
MM Koek, RH Jellema, J van der Greef, AC Tas… - Metabolomics, 2011 - Springer
Metabolomics involves the unbiased quantitative and qualitative analysis of the complete set
of metabolites present in cells, body fluids and tissues (the metabolome). By analyzing …
of metabolites present in cells, body fluids and tissues (the metabolome). By analyzing …