[HTML][HTML] Targeting RNA structures with small molecules
JL Childs-Disney, X Yang, QMR Gibaut… - Nature Reviews Drug …, 2022 - nature.com
RNA adopts 3D structures that confer varied functional roles in human biology and
dysfunction in disease. Approaches to therapeutically target RNA structures with small …
dysfunction in disease. Approaches to therapeutically target RNA structures with small …
[HTML][HTML] Advances in the development of shape similarity methods and their application in drug discovery
A Kumar, KYJ Zhang - Frontiers in chemistry, 2018 - frontiersin.org
Molecular similarity is a key concept in drug discovery. It is based on the assumption that
structurally similar molecules frequently have similar properties. Assessment of similarity …
structurally similar molecules frequently have similar properties. Assessment of similarity …
RNA phase transitions in repeat expansion disorders
A Jain, RD Vale - Nature, 2017 - nature.com
Expansions of short nucleotide repeats produce several neurological and neuromuscular
disorders including Huntington disease, muscular dystrophy, and amyotrophic lateral …
disorders including Huntington disease, muscular dystrophy, and amyotrophic lateral …
Sequence-based design of bioactive small molecules that target precursor microRNAs
Oligonucleotides are designed to target RNA using base pairing rules, but they can be
hampered by poor cellular delivery and nonspecific stimulation of the immune system. Small …
hampered by poor cellular delivery and nonspecific stimulation of the immune system. Small …
Inforna 2.0: a platform for the sequence-based design of small molecules targeting structured RNAs
MD Disney, AM Winkelsas, SP Velagapudi… - ACS chemical …, 2016 - ACS Publications
The development of small molecules that target RNA is challenging yet, if successful, could
advance the development of chemical probes to study RNA function or precision …
advance the development of chemical probes to study RNA function or precision …
Small molecule inhibition of microRNA-210 reprograms an oncogenic hypoxic circuit
MG Costales, CL Haga, SP Velagapudi… - Journal of the …, 2017 - ACS Publications
A hypoxic state is critical to the metastatic and invasive characteristics of cancer. Numerous
pathways play critical roles in cancer maintenance, many of which include noncoding RNAs …
pathways play critical roles in cancer maintenance, many of which include noncoding RNAs …
MBNL proteins and their target RNAs, interaction and splicing regulation
P Konieczny, E Stepniak-Konieczna… - Nucleic acids …, 2014 - academic.oup.com
Muscleblind-like (MBNL) proteins are key regulators of precursor and mature mRNA
metabolism in mammals. Based on published and novel data, we explore models of tissue …
metabolism in mammals. Based on published and novel data, we explore models of tissue …
Targeting RNA in mammalian systems with small molecules
A Donlic, AE Hargrove - Wiley Interdisciplinary Reviews: RNA, 2018 - Wiley Online Library
The recognition of RNA functions beyond canonical protein synthesis has challenged the
central dogma of molecular biology. Indeed, RNA is now known to directly regulate many …
central dogma of molecular biology. Indeed, RNA is now known to directly regulate many …
Hierarchical virtual screening approaches in small molecule drug discovery
A Kumar, KYJ Zhang - Methods, 2015 - Elsevier
Virtual screening has played a significant role in the discovery of small molecule inhibitors of
therapeutic targets in last two decades. Various ligand and structure-based virtual screening …
therapeutic targets in last two decades. Various ligand and structure-based virtual screening …
[HTML][HTML] Short tandem repeat expansions and RNA-mediated pathogenesis in myotonic dystrophy
ŁJ Sznajder, MS Swanson - International Journal of Molecular Sciences, 2019 - mdpi.com
Short tandem repeat (STR) or microsatellite, expansions underlie more than 50 hereditary
neurological, neuromuscular and other diseases, including myotonic dystrophy types 1 …
neurological, neuromuscular and other diseases, including myotonic dystrophy types 1 …