Multiplexed ddPCR-amplicon sequencing reveals isolated Plasmodium falciparum populations amenable to local elimination in Zanzibar, Tanzania

A Holzschuh, A Lerch, I Gerlovina, BS Fakih… - Nature …, 2023 - nature.com
Zanzibar has made significant progress toward malaria elimination, but recent stagnation
requires novel approaches. We developed a highly multiplexed droplet digital PCR (ddPCR) …

[HTML][HTML] Plasmodium falciparum pfhrp2 and pfhrp3 gene deletions and relatedness to other global isolates, Djibouti, 2019–2020

E Rogier, JN McCaffery, MA Mohamed… - Emerging Infectious …, 2022 - ncbi.nlm.nih.gov
Deletions of pfhrp2 and paralogue pfhrp3 (pfhrp2/3) genes threaten Plasmodium falciparum
diagnosis by rapid diagnostic test. We examined 1,002 samples from suspected malaria …

Genetic surveillance reveals low, sustained malaria transmission with clonal replacement in Sao Tome and Principe

YA Chen, PY Ng, D Garcia, A Elliot, B Palmer… - medRxiv, 2024 - medrxiv.org
Despite efforts to eliminate malaria in Sao Tome and Principe (STP), cases have recently
increased. Understanding residual transmission structure is crucial for developing effective …

[图书][B] Understanding Residual Plasmodium falciparum Transmission through Targeted Amplicon Deep Sequencing

AP Holzschuh - 2023 - search.proquest.com
Population genomic data are increasingly being used to improve our understanding of
malaria epidemiology, for example by assessing connectivity between populations and …

Evaluation of a parasite-density based pooled targeted amplicon deep sequencing (TADS) method for molecular surveillance of Plasmodium falciparum drug …

S Louha, C Herman, M Gupta, D Patel, J Kelley… - Plos one, 2022 - journals.plos.org
Sequencing large numbers of individual samples is often needed for countrywide
antimalarial drug resistance surveillance. Pooling DNA from several individual samples is …