[HTML][HTML] Specificities and dynamics of transposable elements in land plants

C Mhiri, F Borges, MA Grandbastien - Biology, 2022 - mdpi.com
Simple Summary Transposable elements are dynamic components of plant genomes, and
display a high diversity of lineages and distribution as the result of evolutionary driving …

[HTML][HTML] Protein-coding genes' retrocopies and their functions

MR Kubiak, I Makałowska - Viruses, 2017 - mdpi.com
Transposable elements, often considered to be not important for survival, significantly
contribute to the evolution of transcriptomes, promoters, and proteomes. Reverse …

Characterization of repeat arrays in ultra‐long nanopore reads reveals frequent origin of satellite DNA from retrotransposon‐derived tandem repeats

T Vondrak, L Ávila Robledillo, P Novák… - The Plant …, 2020 - Wiley Online Library
Amplification of monomer sequences into long contiguous arrays is the main feature
distinguishing satellite DNA from other tandem repeats, yet it is also the main obstacle in its …

LINEs between species: evolutionary dynamics of LINE-1 retrotransposons across the eukaryotic tree of life

AM Ivancevic, RD Kortschak, T Bertozzi… - Genome biology and …, 2016 - academic.oup.com
LINE-1 (L1) retrotransposons are dynamic elements. They have the potential to cause great
genomic change because of their ability to 'jump'around the genome and amplify …

[HTML][HTML] Genome of the world's smallest flowering plant, Wolffia australiana, helps explain its specialized physiology and unique morphology

H Park, JH Park, Y Lee, DU Woo, HH Jeon… - Communications …, 2021 - nature.com
Watermeal, Wolffia australiana, is the smallest known flowering monocot and is rich in
protein. Despite its great potential as a biotech crop, basic research on Wolffia is in its …

DNA methylation of retrotransposons, DNA transposons and genes in sugar beet (Beta vulgaris L.)

F Zakrzewski, M Schmidt, M Van Lijsebettens… - The Plant …, 2017 - Wiley Online Library
The methylation of cytosines shapes the epigenetic landscape of plant genomes,
coordinates transgenerational epigenetic inheritance, represses the activity of transposable …

Human LINE-1 retrotransposition requires a metastable coiled coil and a positively charged N-terminus in L1ORF1p

E Khazina, O Weichenrieder - Elife, 2018 - elifesciences.org
LINE-1 (L1) is an autonomous retrotransposon, which acted throughout mammalian
evolution and keeps contributing to human genotypic diversity, genetic disease and cancer …

Repeat turnover meets stable chromosomes: repetitive DNA sequences mark speciation and gene pool boundaries in sugar beet and wild beets

N Schmidt, K Sielemann, S Breitenbach… - The Plant …, 2024 - Wiley Online Library
Sugar beet and its wild relatives share a base chromosome number of nine and similar
chromosome morphologies. Yet, interspecific breeding is impeded by chromosome and …

[HTML][HTML] Complete pan-plastome sequences enable high resolution phylogenetic classification of sugar beet and closely related crop wild relatives

K Sielemann, B Pucker, N Schmidt, P Viehöver… - BMC genomics, 2022 - Springer
Background As the major source of sugar in moderate climates, sugar-producing beets
(Beta vulgaris subsp. vulgaris) have a high economic value. However, the low genetic …

In and out: Evolution of viral sequences in the mitochondrial genomes of legumes (Fabaceae)

IS Choi, MF Wojciechowski, TA Ruhlman… - Molecular Phylogenetics …, 2021 - Elsevier
Plant specific mitoviruses in the 'genus' Mitovirus (Narnaviridae) and their integrated
sequences (non-retroviral endogenous RNA viral elements or NERVEs) have been recently …