Clinical epigenetics settings for cancer and cardiovascular diseases: real-life applications of network medicine at the bedside

F Sarno, G Benincasa, M List, AL Barabasi… - Clinical …, 2021 - Springer
Despite impressive efforts invested in epigenetic research in the last 50 years, clinical
applications are still lacking. Only a few university hospital centers currently use epigenetic …

Tutorial: design and execution of CRISPR in vivo screens

CJ Braun, AC Adames, D Saur, R Rad - Nature Protocols, 2022 - nature.com
Here we provide a detailed tutorial on CRISPR in vivo screening. Using the mouse as the
model organism, we introduce a range of CRISPR tools and applications, delineate general …

Comparative molecular life history of spontaneous canine and human gliomas

SB Amin, KJ Anderson, CE Boudreau… - Cancer cell, 2020 - cell.com
Sporadic gliomas in companion dogs provide a window on the interaction between
tumorigenic mechanisms and host environment. We compared the molecular profiles of …

The duality of human oncoproteins: drivers of cancer and congenital disorders

P Castel, KA Rauen, F McCormick - Nature Reviews Cancer, 2020 - nature.com
Human oncoproteins promote transformation of cells into tumours by dysregulating the
signalling pathways that are involved in cell growth, proliferation and death. Although …

A machine learning model for the prediction of survival and tumor subtype in pancreatic ductal adenocarcinoma from preoperative diffusion-weighted imaging

G Kaissis, S Ziegelmayer, F Lohöfer, H Algül… - European radiology …, 2019 - Springer
Background To develop a supervised machine learning (ML) algorithm predicting above-
versus below-median overall survival (OS) from diffusion-weighted imaging-derived …

UBE2C: A pan‐cancer diagnostic and prognostic biomarker revealed through bioinformatics analysis

P Jalali, A Samii, M Rezaee, A Shahmoradi… - Cancer …, 2024 - Wiley Online Library
Background The diverse and complex attributes of cancer have made it a daunting
challenge to overcome globally and remains to endanger human life. Detection of critical …

The multiple layers of the tumor environment

L Laplane, D Duluc, N Larmonier, T Pradeu, A Bikfalvi - Trends in cancer, 2018 - cell.com
The notion of tumor microenvironment (TME) has been brought to the forefront of recent
scientific literature on cancer. However, there is no consensus on how to define and spatially …

In vitro 3D Systems to Model Tumor Angiogenesis and Interactions With Stromal Cells

N Brassard-Jollive, C Monnot, L Muller… - Frontiers in cell and …, 2020 - frontiersin.org
In vitro 3D culture systems provide promising tools for screening novel therapies and
understanding drug resistance mechanisms in cancer because they are adapted for high …

Tissue-location-specific transcription programs drive tumor dependencies in colon cancer

L Yang, L Tu, S Bisht, Y Mao, D Petkovich… - Nature …, 2024 - nature.com
Cancers of the same tissue-type but in anatomically distinct locations exhibit different
molecular dependencies for tumorigenesis. Proximal and distal colon cancers exemplify …

KRAS: a druggable target in colon cancer patients

F Negri, L Bottarelli, GL de'Angelis, L Gnetti - International journal of …, 2022 - mdpi.com
Mutations in KRAS are among the most frequent aberrations in cancer, including colon
cancer. KRAS direct targeting is daunting due to KRAS protein resistance to small molecule …