[HTML][HTML] Protein network analysis and functional enrichment via computational biotechnology unravel molecular and pathogenic mechanisms of kidney stone disease
P Peerapen, V Thongboonkerd - biomedical journal, 2023 - Elsevier
Mass spectrometry-based proteomics has been extensively applied to current biomedical
research. From such large-scale identification of proteins, several computational tools have …
research. From such large-scale identification of proteins, several computational tools have …
Prioritization of genes for translation: A computational approach
SC da Silva Rosa, A Barzegar Behrooz… - Expert Review of …, 2024 - Taylor & Francis
Introduction Gene identification for genetic diseases is critical for the development of new
diagnostic approaches and personalized treatment options. Prioritization of gene translation …
diagnostic approaches and personalized treatment options. Prioritization of gene translation …
Protein–Protein Interaction Network Exploration Using Cytoscape
A Majeed, S Mukhtar - Protein-Protein Interactions: Methods and Protocols, 2023 - Springer
As the protein–protein interaction (PPI) data increase exponentially, the development and
usage of computational methods to analyze these datasets have become a new research …
usage of computational methods to analyze these datasets have become a new research …
Medication-Related Osteonecrosis of the Jaw: A Systematic Review and a Bioinformatic Analysis
G Laputková, I Talian, V Schwartzová - International Journal of Molecular …, 2023 - mdpi.com
The objective was to evaluate the current evidence regarding the etiology of medication-
related osteonecrosis of the jaw (MRONJ). This study systematically reviewed the literature …
related osteonecrosis of the jaw (MRONJ). This study systematically reviewed the literature …
Harnessing the predicted maize pan-interactome for putative gene function prediction and prioritization of candidate genes for important traits
The recent assembly and annotation of the 26 maize nested association mapping
population founder inbreds have enabled large-scale pan-genomic comparative studies …
population founder inbreds have enabled large-scale pan-genomic comparative studies …
DKK3 expression is correlated with poorer prognosis in head and neck squamous cell carcinoma: A bioinformatics study based on the TCGA database
N Katase, S Nishimatsu, A Yamauchi, S Okano… - Journal of Oral …, 2023 - Elsevier
Objective We previously reported that dickkopf WNT signaling pathway inhibitor 3 (DKK3)
expression is correlated with poorer prognosis in head and neck squamous cell carcinoma …
expression is correlated with poorer prognosis in head and neck squamous cell carcinoma …
Two-Dimensional Blue Native/SDS Polyacrylamide Gel Electrophoresis for Analysis of Brazilian Bothrops Snake Venoms
N Ferreira de Oliveira, ATA Sachetto, ML Santoro - Toxins, 2022 - mdpi.com
Viperidae snakes are the most important agents of snakebites in Brazil. The protein
composition of snake venoms has been frequently analyzed by means of electrophoretic …
composition of snake venoms has been frequently analyzed by means of electrophoretic …
NADP+ or CO2 reduction by frhAGB-encoded hydrogenase through interaction with formate dehydrogenase 3 in the hyperthermophilic archaeon Thermococcus …
J Yang, HC Jung, HM Oh, BG Choi… - Applied and …, 2023 - Am Soc Microbiol
It has been reported that the frhAGB-encoded hydrogenase from Thermococcus onnurineus
NA1 is homologous to the F420-reducing hydrogenase from methanogens and can reduce …
NA1 is homologous to the F420-reducing hydrogenase from methanogens and can reduce …
Comparative proteomics reveals the mechanism of cyclosporine production and mycelial growth in Tolypocladium inflatum affected by different carbon sources
J Wang, M Liu, C Mao, S Li, J Zhou, Y Fan… - Frontiers in …, 2023 - frontiersin.org
Cyclosporine A (CsA) is a secondary cyclopeptide metabolite produced by Tolypocladium
inflatum that is widely used clinically as an immunosuppressant. CsA production and …
inflatum that is widely used clinically as an immunosuppressant. CsA production and …
[HTML][HTML] Deep-HPI-pred: An R-Shiny applet for network-based classification and prediction of Host-Pathogen protein-protein interactions
MT ul Qamar, F Noor, YX Guo, XT Zhu… - Computational and …, 2024 - Elsevier
Host-pathogen interactions (HPIs) are vital in numerous biological activities and are
intrinsically linked to the onset and progression of infectious diseases. HPIs are pivotal in the …
intrinsically linked to the onset and progression of infectious diseases. HPIs are pivotal in the …