[HTML][HTML] Natural language processing of clinical notes on chronic diseases: systematic review

S Sheikhalishahi, R Miotto, JT Dudley… - JMIR medical …, 2019 - medinform.jmir.org
Background: Novel approaches that complement and go beyond evidence-based medicine
are required in the domain of chronic diseases, given the growing incidence of such …

[HTML][HTML] The shaky foundations of large language models and foundation models for electronic health records

M Wornow, Y Xu, R Thapa, B Patel, E Steinberg… - npj Digital …, 2023 - nature.com
The success of foundation models such as ChatGPT and AlphaFold has spurred significant
interest in building similar models for electronic medical records (EMRs) to improve patient …

Multivariate analysis of 1.5 million people identifies genetic associations with traits related to self-regulation and addiction

R Karlsson Linnér, TT Mallard, PB Barr… - Nature …, 2021 - nature.com
Behaviors and disorders related to self-regulation, such as substance use, antisocial
behavior and attention-deficit/hyperactivity disorder, are collectively referred to as …

A roadmap for foundational research on artificial intelligence in medical imaging: from the 2018 NIH/RSNA/ACR/The Academy Workshop

CP Langlotz, B Allen, BJ Erickson, J Kalpathy-Cramer… - Radiology, 2019 - pubs.rsna.org
Imaging research laboratories are rapidly creating machine learning systems that achieve
expert human performance using open-source methods and tools. These artificial …

[HTML][HTML] Evaluating phecodes, clinical classification software, and ICD-9-CM codes for phenome-wide association studies in the electronic health record

WQ Wei, LA Bastarache, RJ Carroll, JE Marlo… - PloS one, 2017 - journals.plos.org
Objective To compare three groupings of Electronic Health Record (EHR) billing codes for
their ability to represent clinically meaningful phenotypes and to replicate known genetic …

[HTML][HTML] Deep representation learning of electronic health records to unlock patient stratification at scale

I Landi, BS Glicksberg, HC Lee, S Cherng… - NPJ digital …, 2020 - nature.com
Deriving disease subtypes from electronic health records (EHRs) can guide next-generation
personalized medicine. However, challenges in summarizing and representing patient data …

[HTML][HTML] Causal inference in medical records and complementary systems pharmacology for metformin drug repurposing towards dementia

ML Charpignon, B Vakulenko-Lagun, B Zheng… - Nature …, 2022 - nature.com
Metformin, a diabetes drug with anti-aging cellular responses, has complex actions that may
alter dementia onset. Mixed results are emerging from prior observational studies. To …

Penetrance and pleiotropy of polygenic risk scores for schizophrenia in 106,160 patients across four health care systems

AB Zheutlin, J Dennis… - American Journal of …, 2019 - Am Psychiatric Assoc
Objective: Individuals at high risk for schizophrenia may benefit from early intervention, but
few validated risk predictors are available. Genetic profiling is one approach to risk …

Advances in electronic phenotyping: from rule-based definitions to machine learning models

JM Banda, M Seneviratne… - Annual review of …, 2018 - annualreviews.org
With the widespread adoption of electronic health records (EHRs), large repositories of
structured and unstructured patient data are becoming available to conduct observational …

[HTML][HTML] Identifying dementia cases with routinely collected health data: a systematic review

T Wilkinson, A Ly, C Schnier, K Rannikmäe… - Alzheimer's & …, 2018 - Elsevier
Introduction Prospective, population-based studies can be rich resources for dementia
research. Follow-up in many such studies is through linkage to routinely collected, coded …