[HTML][HTML] What's new and what's next in diffusion MRI preprocessing

CMW Tax, M Bastiani, J Veraart, E Garyfallidis… - NeuroImage, 2022 - Elsevier
Diffusion MRI (dMRI) provides invaluable information for the study of tissue microstructure
and brain connectivity, but suffers from a range of imaging artifacts that greatly challenge the …

Convolutional neural network in medical image analysis: a review

SS Kshatri, D Singh - Archives of Computational Methods in Engineering, 2023 - Springer
Medical image analysis helps in resolving clinical issues by examining clinically generated
images. In today's world of deep learning (DL) along with advances in computer vision, the …

[HTML][HTML] Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?

KG Schilling, F Rheault, L Petit, CB Hansen, V Nath… - Neuroimage, 2021 - Elsevier
White matter bundle segmentation using diffusion MRI fiber tractography has become the
method of choice to identify white matter fiber pathways in vivo in human brains. However …

[HTML][HTML] Micapipe: A pipeline for multimodal neuroimaging and connectome analysis

RR Cruces, J Royer, P Herholz, S Larivière… - NeuroImage, 2022 - Elsevier
Multimodal magnetic resonance imaging (MRI) has accelerated human neuroscience by
fostering the analysis of brain microstructure, geometry, function, and connectivity across …

qMRLab: Quantitative MRI analysis, under one umbrella

A Karakuzu, M Boudreau, T Duval… - Journal of Open …, 2020 - publications.polymtl.ca
Magnetic resonance imaging (MRI) has revolutionized the way we look at the human body.
However, conventional MR scanners are not measurement devices. They produce digital …

[HTML][HTML] Brain microstructural changes and fatigue after COVID-19

DDC Bispo, PRP Brandão, DA Pereira… - Frontiers in …, 2022 - frontiersin.org
Background Fatigue and cognitive complaints are the most frequent persistent symptoms in
patients after severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection. This …

[HTML][HTML] Bundle-specific associations between white matter microstructure and Aβ and tau pathology in preclinical Alzheimer's disease

A Pichet Binette, G Theaud, F Rheault, M Roy… - Elife, 2021 - elifesciences.org
Beta-amyloid (Aβ) and tau proteins, the pathological hallmarks of Alzheimer's disease (AD),
are believed to spread through connected regions of the brain. Combining diffusion imaging …

Genetic architecture of the white matter connectome of the human brain

Z Sha, D Schijven, SE Fisher, C Francks - Science advances, 2023 - science.org
White matter tracts form the structural basis of large-scale brain networks. We applied brain-
wide tractography to diffusion images from 30,810 adults (UK Biobank) and found significant …

[HTML][HTML] Reproducible protocol to obtain and measure first-order relay human thalamic white-matter tracts

M Liu, G Lerma-Usabiaga, F Clascá, PM Paz-Alonso - Neuroimage, 2022 - Elsevier
Abstract The “primary” or “first-order relay” nuclei of the thalamus feed the cerebral cortex
with information about ongoing activity in the environment or the subcortical motor systems …

[HTML][HTML] TractoInferno - A large-scale, open-source, multi-site database for machine learning dMRI tractography

P Poulin, G Theaud, F Rheault, E St-Onge, A Bore… - Scientific Data, 2022 - nature.com
TractoInferno is the world's largest open-source multi-site tractography database, including
both research-and clinical-like human acquisitions, aimed specifically at machine learning …