Self‐regulation in a stochastic model of chemical self‐replication
In this article, we provide an analysis of noise propagation in a stochastic minimal model of
chemical self‐replication, where a given species can duplicate itself normally. A feedback …
chemical self‐replication, where a given species can duplicate itself normally. A feedback …
[图书][B] Stochastic foundations for single-cell RNA sequencing
G Gorin - 2023 - search.proquest.com
Single-cell RNA sequencing, which quantifies cell transcriptomes, has seen widespread
adoption, accompanied by proliferation of analysis methods. However, there has been …
adoption, accompanied by proliferation of analysis methods. However, there has been …
[PDF][PDF] Coordination of Gene Expression Noise with Cell Size: Extrinsic Noise versus Agent-Based Models of Growing Cell Populations
P Thomas, V Shahrezaei - scholar.archive.org
The chemical master equation and the stochastic simulation algorithm are widely used to
model the reaction kinetics inside living cells. It is thereby assumed that cell growth and …
model the reaction kinetics inside living cells. It is thereby assumed that cell growth and …
Periodicity in the embryo: emergence of order in space, diffusion of order in time
Does embryonic development exhibit characteristic temporal features? This is apparent in
evolution, where evolutionary change has been shown to occur in bursts of activity. Using …
evolution, where evolutionary change has been shown to occur in bursts of activity. Using …
Framework estimation of stochastic gene activation using transcription average level
L Chen, G Lin, F Jiao - bioRxiv, 2021 - biorxiv.org
Gene activation is usually a non-Markovian process that has been modeled as various
frameworks that consist of multiple rate-limiting steps. Understanding the exact activation …
frameworks that consist of multiple rate-limiting steps. Understanding the exact activation …
The Nonequilibrium Mechanism of Noise Enhancer synergizing with Activator in HIV Latency Reactivation
Noise-modulating chemicals can synergize with transcriptional activators in reactivating
latent HIV to eliminate latent HIV reservoirs. To understand the underlying biomolecular …
latent HIV to eliminate latent HIV reservoirs. To understand the underlying biomolecular …
The Genetic and Mechanical Origins of Tumor Heterogeneity
CT Schunk - 2022 - search.proquest.com
Most of the deaths from cancer are due to metastasis from primary tumor sites to other sites
in the body. Heterogeneity in tumors is associated with increased metastasis and a …
in the body. Heterogeneity in tumors is associated with increased metastasis and a …
Simulation of biochemical systems using constraint-based methods and complex networks
PEP Burke - 2021 - teses.usp.br
Computational models of biomolecular systems have been employed to advance
knowledge in many research areas. They have particular impact in modern areas such as …
knowledge in many research areas. They have particular impact in modern areas such as …