Exploring viral diversity in a gypsum karst lake ecosystem using targeted single-cell genomics

S Šulčius, G Alzbutas, V Juknevičiūtė, E Šimoliūnas… - Genes, 2021 - mdpi.com
Little is known about the diversity and distribution of viruses infecting green sulfur bacteria
(GSB) thriving in euxinic (sulfuric and anoxic) habitats, including gypsum karst lake …

[HTML][HTML] 土壤宏病毒组的研究方法与进展

祁慧鹓, 郑晓璇, 孙明明, 王金锋, 马迎飞, 朱冬… - 土壤 …, 2021 - pedologica.issas.ac.cn
土壤是病毒遗传多样性的储存库, 但由于土壤自身特性及技术手段的限制, 基于传统培养方法对
土壤病毒的研究及功能认知存在局限性. 宏病毒组学技术能直接从土壤环境样品中获取病毒 …

The role of phages for microdiverse bacterial communities in proglacial stream biofilms

H Peter, G Michoud, SB Busi, TJ Battin - Frontiers in Microbiomes, 2024 - frontiersin.org
Viruses modulate the diversity and activity of microbial communities. However, little is known
about their role for the structure of stream bacterial biofilm communities. Here, we present …

Unveiling ecological and genetic novelty within lytic and lysogenic viral communities of hot spring phototrophic microbial mats

S Guajardo-Leiva, F Santos, O Salgado… - Microbiology …, 2021 - Am Soc Microbiol
Viruses exert diverse ecosystem impacts by controlling their host community through lytic
predator-prey dynamics. However, the mechanisms by which lysogenic viruses influence …

Phages-bacteria interactions network of the healthy human gut

M Marbouty, A Thierry, R Koszul - bioRxiv, 2020 - biorxiv.org
With an estimated 1031 particles on earth, bacteriophages are the most abundant genomic
entities across all habitats and important drivers of microbial communities. Growing …

Game-theoretical modeling of interviral conflicts mediated by mini-CRISPR arrays

J Iranzo, G Faure, YI Wolf, EV Koonin - Frontiers in Microbiology, 2020 - frontiersin.org
All cellular organisms coevolve with multiple viruses, so that both virus-host and intervirus
conflicts are major factors of evolution. Accordingly, hosts evolve multiple, elaborate defense …

Intraguild predation: Predatory networks at the microbial scale

A Kuppardt-Kirmse, A Chatzinotas - The ecology of predation at the …, 2020 - Springer
Microbes live and interact within diverse communities of organisms which are embedded in
complex networks of competition, parasitism, and predation. Predatory interactions in …

Host-Dependent Differences in Replication Strategy of the Sulfolobus Spindle-Shaped Virus Strain SSV9 (aka, SSVK1): Infection Profiles in Hosts of the Family …

RM Ceballos, CG Drummond, CL Stacy… - Frontiers in …, 2020 - frontiersin.org
The Sulfolobus Spindle-shaped Virus (SSV) system has become a model for studying
thermophilic virus biology, including archaeal host-virus interactions and biogeography …

Comparative metagenomics at Solfatara and Pisciarelli hydrothermal systems in Italy reveal that ecological differences across substrates are not ubiquitous

IR Ugwuanyi, ML Fogel, R Bowden, A Steele… - Frontiers in …, 2023 - frontiersin.org
Introduction Continental hydrothermal systems (CHSs) are geochemically complex, and they
support microbial communities that vary across substrates. However, our understanding of …

Direct and indirect viral associations predict coexistence in wild plant virus communities

A Norberg, H Susi, S Sallinen, P Baran, NJ Clark… - Current Biology, 2023 - cell.com
Viruses are a vastly underestimated component of biodiversity that occur as diverse
communities across hierarchical scales from the landscape level to individual hosts. The …