The predictability of molecular evolution during functional innovation

D Blank, L Wolf, M Ackermann… - Proceedings of the …, 2014 - National Acad Sciences
Determining the molecular changes that give rise to functional innovations is a major
unresolved problem in biology. The paucity of examples has served as a significant …

Narrative of a versatile and adept species Pseudomonas putida

M Kivisaar - Journal of medical microbiology, 2020 - microbiologyresearch.org
Pseudomonas putida is a fast-growing bacterium found mostly in temperate soil and water
habitats. The metabolic versatility of P. putida makes this organism attractive for …

Adaptation of Cornamonas testosteroni TAM1 to utilize phenol: organization and regulation of the genes involved in phenol degradatio

H Arai, S Akahira, T Ohishi, M Maeda… - Microbiology, 1998 - microbiologyresearch.org
Comamonas testosteroni TAU1 was not able to grow on phenol as a sole carbon and
energy source, but it gained the ability to utilize phenol after a 2-3-week incubation in a …

Freeing Pseudomonas putida KT2440 of its proviral load strengthens endurance to environmental stresses

E Martínez‐García, T Jatsenko… - Environmental …, 2015 - Wiley Online Library
6% of the genome of the soil bacterium P seudomonas putida KT 2440 encodes phage‐
related functions, but the burden of such opportunistic DNA on the host physiology is …

Involvement of ςS in Starvation-Induced Transposition of Pseudomonas putidaTransposon Tn4652

H Ilves, R Hõrak, M Kivisaar - Journal of bacteriology, 2001 - Am Soc Microbiol
Transpositional activity of mobile elements can be induced by different environmental
stresses. Here, we present evidence that transposition of Tn 4652 is elevated in stationary …

Mutation and cancer: the antecedents to our studies of adaptive mutation

J Cairns - Genetics, 1998 - academic.oup.com
LITTLE excuse is needed for still being interested environment) or simply to optimize the
return from investing in protective mechanisms (a matter of costs in mutation. We are here …

Transient and heritable mutators in adaptive evolution in the lab and in nature

SM Rosenberg, C Thulin, RS Harris - Genetics, 1998 - academic.oup.com
Major advances in understanding the molecular mechanism of recombination-dependent
stationary-phase mutation in Escherichia coli occurred this past year. These advances are …

Prokaryote and eukaryote evolvability

AM Poole, MJ Phillips, D Penny - Biosystems, 2003 - Elsevier
The concept of evolvability covers a broad spectrum of, often contradictory, ideas. At one
end of the spectrum it is equivalent to the statement that evolution is possible, at the other …

Manifestation of the Kanagawa phenomenon, the virulence‐associated phenotype, of Vibrio parahaemolyticus depends on a particular single base change in the …

J Okuda, M Nishibuchi - Molecular microbiology, 1998 - Wiley Online Library
Thermostable direct haemolysin of Vibrio parahaemolyticus has been shown to be a major
virulence factor. The Kanagawa phenomenon (KP), haemolysis induced by this haemolysin …

Stationary phase mutagenesis: mechanisms that accelerate adaptation of microbial populations under environmental stress

M Kivisaar - Environmental microbiology, 2003 - Wiley Online Library
Microorganisms are exposed to constantly changing environmental conditions. In a growth‐
restricting environment (eg during starvation), mutants arise that are able to take over the …