NHEJ enzymes LigD and Ku participate in stationary-phase mutagenesis in Pseudomonas putida
Ü Paris, K Mikkel, K Tavita, S Saumaa, R Teras… - DNA repair, 2015 - Elsevier
Under growth-restricting conditions bacterial populations can rapidly evolve by a process
known as stationary-phase mutagenesis. Bacterial nonhomologous end-joining (NHEJ) …
known as stationary-phase mutagenesis. Bacterial nonhomologous end-joining (NHEJ) …
Compiling sigma-70-dependent promoters
P Domínguez-Cuevas, S Marqués - Virulence and gene regulation, 2004 - Springer
Promoters are sequences that precede transcriptional start sites and determine recognition
by RNA polymerases to initiate transcription. Most bacterial genes are regulated at the level …
by RNA polymerases to initiate transcription. Most bacterial genes are regulated at the level …
Mismatch Repair Modulation of MutY Activity Drives Bacillus subtilis Stationary-Phase Mutagenesis
BN Debora, LE Vidales, R Ramírez… - Journal of …, 2011 - Am Soc Microbiol
Stress-promoted mutations that occur in nondividing cells (adaptive mutations) have been
implicated strongly in causing genetic variability as well as in species survival and …
implicated strongly in causing genetic variability as well as in species survival and …
Error-prone processing of apurinic/apyrimidinic (AP) sites by PolX underlies a novel mechanism that promotes adaptive mutagenesis in Bacillus subtilis
RC Barajas-Ornelas, FH Ramírez-Guadiana… - Journal of …, 2014 - Am Soc Microbiol
In growing cells, apurinic/apyrimidinic (AP) sites generated spontaneously or resulting from
the enzymatic elimination of oxidized bases must be processed by AP endonucleases …
the enzymatic elimination of oxidized bases must be processed by AP endonucleases …
Different Spectra of Stationary-Phase Mutations in Early-Arising versus Late-Arising Mutants of Pseudomonas putida: Involvement of the DNA Repair Enzyme MutY …
S Saumaa, A Tover, L Kasak, M Kivisaar - Journal of bacteriology, 2002 - Am Soc Microbiol
Stationary-phase mutations occur in populations of stressed, nongrowing, and slowly
growing cells and allow mutant bacteria to overcome growth barriers. Mutational processes …
growing cells and allow mutant bacteria to overcome growth barriers. Mutational processes …
Bacterial strategies for growth on aromatic compounds
Although the biodegradation of aromatic compounds has been studied for over 40 years,
there is still much to learn about the strategies bacteria employ for growth on novel …
there is still much to learn about the strategies bacteria employ for growth on novel …
Promoter propagation in prokaryotes
M Matus-Garcia, H Nijveen… - Nucleic acids …, 2012 - academic.oup.com
Transcriptional activation or 'rewiring'of silent genes is an important, yet poorly understood,
phenomenon in prokaryotic genomes. Anecdotal evidence coming from experimental …
phenomenon in prokaryotic genomes. Anecdotal evidence coming from experimental …
Dual role of NER in mutagenesis in Pseudomonas putida
M Tark, A Tover, L Koorits, R Tegova, M Kivisaar - DNA repair, 2008 - Elsevier
Nucleotide excision repair (NER) is one of the most important repair systems which
counteracts different forms of DNA damage either induced by various chemicals or …
counteracts different forms of DNA damage either induced by various chemicals or …
Weakly deleterious mutations and low rates of recombination limit the impact of natural selection on bacterial genomes
Free-living bacteria are usually thought to have large effective population sizes, and so tiny
selective differences can drive their evolution. However, because recombination is …
selective differences can drive their evolution. However, because recombination is …
The ColR–ColS two‐component signal transduction system is involved in regulation of Tn4652 transposition in Pseudomonas putida under starvation conditions
Bacteria use two‐component signal transduction pathways to sense both extracellular and
intracellular environment and to coordinate cellular events according to changing …
intracellular environment and to coordinate cellular events according to changing …