Protein–DNA/RNA interactions: an overview of investigation methods in the-omics era

F Cozzolino, I Iacobucci, V Monaco… - Journal of Proteome …, 2021 - ACS Publications
The fields of application of functional proteomics are not limited to the study of protein–
protein interactions; they also extend to those involving protein complexes that bind DNA or …

A comprehensive review of the functions of YB-1 in cancer stemness, metastasis and drug resistance

A Alkrekshi, W Wang, PS Rana, V Markovic… - Cellular signalling, 2021 - Elsevier
The Y Box binding protein 1 (YB-1) is a member of the highly conserved Cold Shock Domain
protein family with multifunctional properties both in the cytoplasm and inside the nucleus …

[HTML][HTML] Cold-shock domains—abundance, structure, properties, and nucleic-acid binding

U Heinemann, Y Roske - Cancers, 2021 - mdpi.com
Simple Summary Proteins are composed of compact domains, often of known three-
dimensional structure, and natively unstructured polypeptide regions. The abundant cold …

CircIPO7 promotes nasopharyngeal carcinoma metastasis and cisplatin chemoresistance by facilitating YBX1 nuclear localization

X Hong, Q Li, J Li, K Chen, Q He, Y Zhao, Y Liang… - Clinical Cancer …, 2022 - AACR
Purpose: Cisplatin-based chemotherapy effectively improves the distant-metastasis control
in nasopharyngeal carcinoma (NPC), but approximately 30% of patients develop treatment …

[HTML][HTML] YBX1 integration of oncogenic PI3K/mTOR signalling regulates the fitness of malignant epithelial cells

Y Bai, C Gotz, G Chincarini, Z Zhao, C Slaney… - Nature …, 2023 - nature.com
In heterogeneous head and neck cancer (HNC), subtype-specific treatment regimens are
currently missing. An integrated analysis of patient HNC subtypes using single-cell …

[HTML][HTML] Long non-coding RNA aerrie controls DNA damage repair via YBX1 to maintain endothelial cell function

TP Pham, DI Bink, L Stanicek, A Van Bergen… - Frontiers in cell and …, 2021 - frontiersin.org
Aging is accompanied by many physiological changes. These changes can progressively
lead to many types of cardiovascular diseases. During this process blood vessels lose their …

YB-1 unwinds mRNA secondary structures in vitro and negatively regulates stress granule assembly in HeLa cells

K Budkina, K El Hage, MJ Clément… - Nucleic acids …, 2021 - academic.oup.com
In the absence of the scanning ribosomes that unwind mRNA coding sequences and 5′
UTRs, mRNAs are likely to form secondary structures and intermolecular bridges …

[HTML][HTML] TOPK promotes the growth of esophageal cancer in vitro and in vivo by enhancing YB1/eEF1A1 signal pathway

W Wu, J Xu, D Gao, Z Xie, W Chen, W Li, Q Yuan… - Cell Death & …, 2023 - nature.com
T-LAK-originated protein kinase (TOPK), a dual specificity serine/threonine kinase, is up-
regulated and related to poor prognosis in many types of cancers. Y-box binding protein 1 …

[HTML][HTML] ERK/RSK-mediated phosphorylation of Y-box binding protein-1 aggravates diabetic cardiomyopathy by suppressing its interaction with deubiquitinase …

X Zhong, T Wang, W Zhang, M Wang, Y Xie… - Journal of Biological …, 2022 - ASBMB
Diabetic cardiomyopathy (DCM) is a major complication of diabetes, but its underlying
mechanisms still remain unclear. The multifunctional protein Y-box binding protein-1 (YB-1) …

[HTML][HTML] Novel insights into YB-1 signaling and cell death decisions

A Shah, JA Lindquist, L Rosendahl, I Schmitz… - Cancers, 2021 - mdpi.com
Simple Summary Signals that determine cell survival or death are essential for maintaining
tissue homeostasis. Cell death promotes the removal of unwanted cells; however, a failure …