Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate

NA Bokulich, JH Thorngate… - Proceedings of the …, 2014 - National Acad Sciences
Wine grapes present a unique biogeography model, wherein microbial biodiversity patterns
across viticultural zones not only answer questions of dispersal and community …

Scaling up: A guide to high‐throughput genomic approaches for biodiversity analysis

TM Porter, M Hajibabaei - Molecular ecology, 2018 - Wiley Online Library
The purpose of this review is to present the most common and emerging DNA‐based
methods used to generate data for biodiversity and biomonitoring studies. As environmental …

Carbon sequestration is related to mycorrhizal fungal community shifts during long‐term succession in boreal forests

KE Clemmensen, RD Finlay, A Dahlberg… - New …, 2015 - Wiley Online Library
Boreal forest soils store a major proportion of the global terrestrial carbon (C) and below‐
ground inputs contribute as much as above‐ground plant litter to the total C stored in the …

[HTML][HTML] Microbial functional changes mark irreversible course of Tibetan grassland degradation

A Breidenbach, PM Schleuss, S Liu… - Nature …, 2022 - nature.com
Abstract The Tibetan Plateau's Kobresia pastures store 2.5% of the world's soil organic
carbon (SOC). Climate change and overgrazing render their topsoils vulnerable to …

[PDF][PDF] Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi

L Tedersoo, S Anslan, M Bahram, S Põlme, T Riit… - …, 2015 - mycokeys.pensoft.net
Rapid development of high-throughput (HTS) molecular identification methods has
revolutionized our knowledge about taxonomic diversity and ecology of fungi. However …

Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits

JW Leff, RD Bardgett, A Wilkinson, BG Jackson… - The ISME …, 2018 - academic.oup.com
There are numerous ways in which plants can influence the composition of soil
communities. However, it remains unclear whether information on plant community …

Fungal diversity notes 603–708: taxonomic and phylogenetic notes on genera and species

KD Hyde, C Norphanphoun, VP Abreu, A Bazzicalupo… - Fungal Diversity, 2017 - Springer
This is the sixth in a series of papers where we bring collaborating mycologists together to
produce a set of notes of several taxa of fungi. In this study we introduce a new family …

Spatial heterogeneity of the microbiome and metabolome profiles of high-temperature Daqu in the same workshop

W Shi, LJ Chai, GY Fang, JL Mei, ZM Lu… - Food Research …, 2022 - Elsevier
High-temperature Daqu, usually used as a fermentation starter for sauce-flavor Baijiu
production, plays an essential role in the yield and flavor quality of Baijiu. The environmental …

Fungal community analysis by high‐throughput sequencing of amplified markers–a user's guide

BD Lindahl, RH Nilsson, L Tedersoo… - New …, 2013 - Wiley Online Library
Novel high‐throughput sequencing methods outperform earlier approaches in terms of
resolution and magnitude. They enable identification and relative quantification of …

Dispersal in microbes: fungi in indoor air are dominated by outdoor air and show dispersal limitation at short distances

RI Adams, M Miletto, JW Taylor, TD Bruns - The ISME journal, 2013 - academic.oup.com
The indoor microbiome is a complex system that is thought to depend on dispersal from the
outdoor biome and the occupants' microbiome combined with selective pressures imposed …