[HTML][HTML] Human long noncoding RNA interactome: detection, characterization and function

M Kazimierczyk, MK Kasprowicz, ME Kasprzyk… - International journal of …, 2020 - mdpi.com
The application of a new generation of sequencing techniques has revealed that most of the
genome has already been transcribed. However, only a small part of the genome codes …

[HTML][HTML] RNA-DNA triplex formation by long noncoding RNAs

Y Li, J Syed, H Sugiyama - Cell chemical biology, 2016 - cell.com
Long noncoding RNAs (lncRNAs) play a pivotal role in the regulation of biological
processes through various mechanisms that are not fully understood. Proposed …

Mass spectrometry of nucleic acid noncovalent complexes

E Largy, A Konig, A Ghosh, D Ghosh… - Chemical …, 2021 - ACS Publications
Nucleic acids have been among the first targets for antitumor drugs and antibiotics. With the
unveiling of new biological roles in regulation of gene expression, specific DNA and RNA …

DNA hydrogels and nanogels for diagnostics, therapeutics, and theragnostics of various cancers

I Zare, R Taheri-Ledari, F Esmailzadeh, MM Salehi… - Nanoscale, 2023 - pubs.rsc.org
As an efficient class of hydrogel-based therapeutic drug delivery systems, deoxyribonucleic
acid (DNA) hydrogels (particularly DNA nanogels) have attracted massive attention in the …

[HTML][HTML] RADICL-seq identifies general and cell type–specific principles of genome-wide RNA-chromatin interactions

A Bonetti, F Agostini, AM Suzuki, K Hashimoto… - Nature …, 2020 - nature.com
Mammalian genomes encode tens of thousands of noncoding RNAs. Most noncoding
transcripts exhibit nuclear localization and several have been shown to play a role in the …

[HTML][HTML] LncRNA MIR100HG promotes cell proliferation in triple-negative breast cancer through triplex formation with p27 loci

S Wang, H Ke, H Zhang, Y Ma, L Ao, L Zou… - Cell death & …, 2018 - nature.com
Triple-negative breast cancer (TNBC) exhibits poor prognosis, with high metastasis and low
survival. Long non-coding RNAs (lncRNAs) play critical roles in tumor progression. Here, we …

The lncRNA HOTAIR impacts on mesenchymal stem cells via triple helix formation

M Kalwa, S Hänzelmann, S Otto, CC Kuo… - Nucleic acids …, 2016 - academic.oup.com
There is a growing perception that long non-coding RNAs (lncRNAs) modulate cellular
function. In this study, we analyzed the role of the lncRNA HOTAIR in mesenchymal stem …

[HTML][HTML] Realizing the significance of noncoding functionality in clinical genomics

BS Gloss, ME Dinger - Experimental & molecular medicine, 2018 - nature.com
Clinical genomics promises unprecedented precision in understanding the genetic basis of
disease. Understanding the impact of variation across the genome is required to realize this …

[HTML][HTML] Genome organization in and around the nucleolus

C Bersaglieri, R Santoro - Cells, 2019 - mdpi.com
The nucleolus is the largest substructure in the nucleus, where ribosome biogenesis takes
place, and forms around the nucleolar organizer regions (NORs) that comprise ribosomal …

Targeting RNA in mammalian systems with small molecules

A Donlic, AE Hargrove - Wiley Interdisciplinary Reviews: RNA, 2018 - Wiley Online Library
The recognition of RNA functions beyond canonical protein synthesis has challenged the
central dogma of molecular biology. Indeed, RNA is now known to directly regulate many …