[HTML][HTML] Networks beyond pairwise interactions: Structure and dynamics

F Battiston, G Cencetti, I Iacopini, V Latora, M Lucas… - Physics reports, 2020 - Elsevier
The complexity of many biological, social and technological systems stems from the richness
of the interactions among their units. Over the past decades, a variety of complex systems …

Neural population geometry: An approach for understanding biological and artificial neural networks

SY Chung, LF Abbott - Current opinion in neurobiology, 2021 - Elsevier
Advances in experimental neuroscience have transformed our ability to explore the structure
and function of neural circuits. At the same time, advances in machine learning have …

Structuring knowledge with cognitive maps and cognitive graphs

M Peer, IK Brunec, NS Newcombe… - Trends in cognitive …, 2021 - cell.com
Humans and animals use mental representations of the spatial structure of the world to
navigate. The classical view is that these representations take the form of Euclidean …

Navigating cognition: Spatial codes for human thinking

JLS Bellmund, P Gärdenfors, EI Moser, CF Doeller - Science, 2018 - science.org
BACKGROUND Ever since Edward Tolman's proposal that comprehensive cognitive maps
underlie spatial navigation and, more generally, psychological functions, the question of …

The cognitive map in humans: spatial navigation and beyond

RA Epstein, EZ Patai, JB Julian, HJ Spiers - Nature neuroscience, 2017 - nature.com
The'cognitive map'hypothesis proposes that brain builds a unified representation of the
spatial environment to support memory and guide future action. Forty years of …

Rethinking retrosplenial cortex: perspectives and predictions

AS Alexander, R Place, MJ Starrett, ER Chrastil… - Neuron, 2023 - cell.com
The last decade has produced exciting new ideas about retrosplenial cortex (RSC) and its
role in integrating diverse inputs. Here, we review the diversity in forms of spatial and …

Topological data analysis

L Wasserman - Annual Review of Statistics and Its Application, 2018 - annualreviews.org
Topological data analysis (TDA) can broadly be described as a collection of data analysis
methods that find structure in data. These methods include clustering, manifold estimation …

[PDF][PDF] A roadmap for the computation of persistent homology

N Otter, MA Porter, U Tillmann, P Grindrod… - EPJ Data Science, 2017 - Springer
Persistent homology (PH) is a method used in topological data analysis (TDA) to study
qualitative features of data that persist across multiple scales. It is robust to perturbations of …

Two's company, three (or more) is a simplex: Algebraic-topological tools for understanding higher-order structure in neural data

C Giusti, R Ghrist, DS Bassett - Journal of computational neuroscience, 2016 - Springer
The language of graph theory, or network science, has proven to be an exceptional tool for
addressing myriad problems in neuroscience. Yet, the use of networks is predicated on a …

Hippocampal and prefrontal processing of network topology to simulate the future

AH Javadi, B Emo, LR Howard, FE Zisch, Y Yu… - Nature …, 2017 - nature.com
Topological networks lie at the heart of our cities and social milieu. However, it remains
unclear how and when the brain processes topological structures to guide future behaviour …