Dynamic alternative DNA structures in biology and disease
G Wang, KM Vasquez - Nature Reviews Genetics, 2023 - nature.com
Repetitive elements in the human genome, once considered 'junk DNA', are now known to
adopt more than a dozen alternative (that is, non-B) DNA structures, such as self-annealed …
adopt more than a dozen alternative (that is, non-B) DNA structures, such as self-annealed …
[HTML][HTML] Hallmarks of DNA replication stress
Faithful DNA replication is critical for the maintenance of genomic integrity. Although DNA
replication machinery is highly accurate, the process of DNA replication is constantly …
replication machinery is highly accurate, the process of DNA replication is constantly …
Landscape of somatic mutations in 560 breast cancer whole-genome sequences
We analysed whole-genome sequences of 560 breast cancers to advance understanding of
the driver mutations conferring clonal advantage and the mutational processes generating …
the driver mutations conferring clonal advantage and the mutational processes generating …
Maintaining genome stability at the replication fork
D Branzei, M Foiani - Nature reviews Molecular cell biology, 2010 - nature.com
Aberrant DNA replication is a major source of the mutations and chromosome
rearrangements that are associated with pathological disorders. When replication is …
rearrangements that are associated with pathological disorders. When replication is …
Transcription-coupled DNA repair: two decades of progress and surprises
PC Hanawalt, G Spivak - Nature reviews Molecular cell biology, 2008 - nature.com
Expressed genes are scanned by translocating RNA polymerases, which sensitively detect
DNA damage and initiate transcription-coupled repair (TCR), a subpathway of nucleotide …
DNA damage and initiate transcription-coupled repair (TCR), a subpathway of nucleotide …
Non-B DNA: a major contributor to small-and large-scale variation in nucleotide substitution frequencies across the genome
Approximately 13% of the human genome can fold into non-canonical (non-B) DNA
structures (eg G-quadruplexes, Z-DNA, etc.), which have been implicated in vital cellular …
structures (eg G-quadruplexes, Z-DNA, etc.), which have been implicated in vital cellular …
[HTML][HTML] Transposable elements: genome innovation, chromosome diversity, and centromere conflict
SJ Klein, RJ O'Neill - Chromosome Research, 2018 - Springer
Although it was nearly 70 years ago when transposable elements (TEs) were first
discovered “jumping” from one genomic location to another, TEs are now recognized as …
discovered “jumping” from one genomic location to another, TEs are now recognized as …
Eukaryotic chromosome DNA replication: where, when, and how?
H Masai, S Matsumoto, Z You… - Annual review of …, 2010 - annualreviews.org
DNA replication is central to cell proliferation. Studies in the past six decades since the
proposal of a semiconservative mode of DNA replication have confirmed the high degree of …
proposal of a semiconservative mode of DNA replication have confirmed the high degree of …
Non-B DNA structure-induced genetic instability and evolution
J Zhao, A Bacolla, G Wang, KM Vasquez - Cellular and molecular life …, 2010 - Springer
Repetitive DNA motifs are abundant in the genomes of various species and have the
capacity to adopt non-canonical (ie, non-B) DNA structures. Several non-B DNA structures …
capacity to adopt non-canonical (ie, non-B) DNA structures. Several non-B DNA structures …
[HTML][HTML] Transposable elements in human cancer: causes and consequences of deregulation
Transposable elements (TEs) comprise nearly half of the human genome and play an
essential role in the maintenance of genomic stability, chromosomal architecture, and …
essential role in the maintenance of genomic stability, chromosomal architecture, and …