Origins of specificity in protein-DNA recognition
Specific interactions between proteins and DNA are fundamental to many biological
processes. In this review, we provide a revised view of protein-DNA interactions that …
processes. In this review, we provide a revised view of protein-DNA interactions that …
Nucleoid-associated proteins shape chromatin structure and transcriptional regulation across the bacterial kingdom
HM Amemiya, J Schroeder, PL Freddolino - Transcription, 2021 - Taylor & Francis
Genome architecture has proven to be critical in determining gene regulation across almost
all domains of life. While many of the key components and mechanisms of eukaryotic …
all domains of life. While many of the key components and mechanisms of eukaryotic …
MicF: an antisense RNA gene involved in response of Escherichia coli to global stress factors
N Delihas, S Forst - Journal of molecular biology, 2001 - Elsevier
The micF gene is a stress response gene found in Escherichia coli and related bacteria that
post-transcriptionally controls expression of the outer membrane porin gene ompF. The micF …
post-transcriptionally controls expression of the outer membrane porin gene ompF. The micF …
Global Gene Expression Profiling in Escherichia coliK12: THE EFFECTS OF INTEGRATION HOST FACTOR* 210
We have used nylon membranes spotted in duplicate with full-length polymerase chain
reaction-generated products of each of the 4,290 predicted Escherichia coli K12 open …
reaction-generated products of each of the 4,290 predicted Escherichia coli K12 open …
Metabolic engineering in the-omics era: elucidating and modulating regulatory networks
GN Vemuri, AA Aristidou - Microbiology and Molecular Biology …, 2005 - Am Soc Microbiol
The importance of regulatory control in metabolic processes is widely acknowledged, and
several enquiries (both local and global) are being made in understanding regulation at …
several enquiries (both local and global) are being made in understanding regulation at …
IHF and HU stimulate assembly of pre‐replication complexes at Escherichia coli oriC by two different mechanisms
VT Ryan, JE Grimwade, CJ Nievera… - Molecular …, 2002 - Wiley Online Library
Pre‐replication complexes (pre‐RC) assemble on replication origins and unwind DNA in the
presence of chromatin proteins. As components of Escherichia coli pre‐RC, two histone‐like …
presence of chromatin proteins. As components of Escherichia coli pre‐RC, two histone‐like …
Blocking, Bending, and Binding: Regulation of Initiation of Chromosome Replication During the Escherichia coli Cell Cycle by Transcriptional Modulators That Interact …
JE Grimwade, AC Leonard - Frontiers in microbiology, 2021 - frontiersin.org
Genome duplication is a critical event in the reproduction cycle of every cell. Because all
daughter cells must inherit a complete genome, chromosome replication is tightly regulated …
daughter cells must inherit a complete genome, chromosome replication is tightly regulated …
Building a bacterial orisome: emergence of new regulatory features for replication origin unwinding
AC Leonard, JE Grimwade - Molecular microbiology, 2005 - Wiley Online Library
Triggering new rounds of chromosomal DNA replication during the bacterial cell cycle is
exquisitely regulated, ensuring both proper timing and one round per cycle stringency. A …
exquisitely regulated, ensuring both proper timing and one round per cycle stringency. A …
The nucleoid-associated protein IHF acts as a 'transcriptional domainin'protein coordinating the bacterial virulence traits with global transcription
S Reverchon, S Meyer, R Forquet… - Nucleic acids …, 2021 - academic.oup.com
Bacterial pathogenic growth requires a swift coordination of pathogenicity function with
various kinds of environmental stress encountered in the course of host infection. Among the …
various kinds of environmental stress encountered in the course of host infection. Among the …
Integration host factor and LuxR synergistically bind DNA to coactivate quorum‐sensing genes in Vibrio harveyi
RR Chaparian, SG Olney, CM Hustmyer… - Molecular …, 2016 - Wiley Online Library
The cell–cell signaling process called quorum sensing allows bacteria to control behaviors
in response to changes in population density. In Vibrio harveyi, the master quorum‐sensing …
in response to changes in population density. In Vibrio harveyi, the master quorum‐sensing …