The λ integrase site‐specific recombination pathway

A Landy - Mobile DNA III, 2015 - Wiley Online Library
The λ site‐specific recombination pathway has enjoyed the sequential attentions of
geneticists, biochemists, and structural biologists for more than 50 years. It has proven to be …

[HTML][HTML] Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn

PA Rice, S Yang, K Mizuuchi, HA Nash - Cell, 1996 - cell.com
Integration host factor (IHF) is a small heterodimeric protein that specifically binds to DNA
and functions as an architectural factor in many cellular processes in prokaryotes. Here, we …

Making DNA do a U-turn: IHF and related proteins

PA Rice - Current opinion in structural biology, 1997 - Elsevier
IHF and HU belong to a family of proteins that introduce sharp bends into DNA and act as
accessory factors in a variety of cellular processes in prokaryotes. In addition to the crystal …

λ integrase and the λ Int family

MA Azaro, A Landy - Mobile DNA II, 2007 - Wiley Online Library
This chapter starts with Allan Campbell's insightful proposal for the pathway by which the
chromosome of bacteriophage λ is integrated into and excised from the chromosome of its …

Integration host factor stimulates both FimB‐and FimE‐mediated site‐specific DNA inversion that controls phase variation of type 1 fimbriae expression in Escherichia …

IC Blomfield, DH Kulasekara… - Molecular …, 1997 - Wiley Online Library
The site‐specific DNA inversion that controls phase variation of type 1 fimbriation in E. coli is
catalysed by two recombinases, FimB and FimE. Efficient inversion by either recombinase …

Suppression of FNR‐dependent transcription activation at the Escherichia coli nir promoter by Fis, IHF and H‐NS: modulation of transcription initiation by a complex …

DF Browning, JA Cole, SJW Busby - Molecular microbiology, 2000 - Wiley Online Library
Expression from the Escherichia coli nir promoter is co‐dependent on both the FNR protein
(an anaerobically triggered transcription activator) and the NarL or NarP proteins …

In vitro selection of integration host factor binding sites

SD Goodman, NJ Velten, Q Gao, S Robinson… - Journal of …, 1999 - Am Soc Microbiol
Integration host factor (IHF) is a bacterial protein that binds and severely bends a specific
DNA target. IHF binding sites are approximately 30 to 35 bp long and are apparently divided …

[HTML][HTML] Anatomy of a flexer–DNA complex inside a higher-order transposition intermediate

BD Lavoie, GS Shaw, A Millner, G Chaconas - Cell, 1996 - cell.com
Escherichia coli HU, a nonsequence-specific histone-and HMG-like DNA-binding protein,
was chemically converted into a series of HU-nucleases with an iron–EDTA-based cleavage …

Genome organisation and chromatin structure in Escherichia coli

D Ussery, TS Larsen, KT Wilkes, C Friis, P Worning… - Biochimie, 2001 - Elsevier
We have analysed the complete sequence of the Escherichia coli K12 isolate MG1655
genome for chromatin-associated protein binding sites, and compared the predicted location …

A novel host factor for integration of mycobacteriophage L5

ML Pedulla, MH Lee, DC Lever… - Proceedings of the …, 1996 - National Acad Sciences
Bacterial integration host factors (IHFs) play central roles in the cellular processes of
recombination, DNA replication, transcription, and bacterial pathogenesis. We describe here …