Machine learning approaches and databases for prediction of drug–target interaction: a survey paper

M Bagherian, E Sabeti, K Wang… - Briefings in …, 2021 - academic.oup.com
The task of predicting the interactions between drugs and targets plays a key role in the
process of drug discovery. There is a need to develop novel and efficient prediction …

[HTML][HTML] Artificial intelligence in pharmaceutical sciences

M Lu, J Yin, Q Zhu, G Lin, M Mou, F Liu, Z Pan, N You… - Engineering, 2023 - Elsevier
Drug discovery and development affects various aspects of human health and dramatically
impacts the pharmaceutical market. However, investments in a new drug often go …

Improving protein-protein interactions prediction accuracy using XGBoost feature selection and stacked ensemble classifier

C Chen, Q Zhang, B Yu, Z Yu, PJ Lawrence… - Computers in biology …, 2020 - Elsevier
Protein-protein interactions (PPIs) are involved with most cellular activities at the proteomic
level, making the study of PPIs necessary to comprehending any biological process …

LightGBM-PPI: Predicting protein-protein interactions through LightGBM with multi-information fusion

C Chen, Q Zhang, Q Ma, B Yu - Chemometrics and Intelligent Laboratory …, 2019 - Elsevier
Protein-protein interactions (PPIs) play an important role in cell life activities such as
transcriptional regulation, signal transduction and drug signal transduction. The study of …

Identification of drug–target interactions via dual laplacian regularized least squares with multiple kernel fusion

Y Ding, J Tang, F Guo - Knowledge-Based Systems, 2020 - Elsevier
Abstract Detection of Drug–Target Interactions (DTIs) is the time-consuming and laborious
experiment via biochemical approaches. Machine learning based methods have been …

Anticancer peptides prediction with deep representation learning features

Z Lv, F Cui, Q Zou, L Zhang, L Xu - Briefings in bioinformatics, 2021 - academic.oup.com
Anticancer peptides constitute one of the most promising therapeutic agents for combating
common human cancers. Using wet experiments to verify whether a peptide displays …

DTI-CDF: a cascade deep forest model towards the prediction of drug-target interactions based on hybrid features

Y Chu, AC Kaushik, X Wang, W Wang… - Briefings in …, 2021 - academic.oup.com
Drug–target interactions (DTIs) play a crucial role in target-based drug discovery and
development. Computational prediction of DTIs can effectively complement experimental …

Identification of drug–target interactions via multiple kernel-based triple collaborative matrix factorization

Y Ding, J Tang, F Guo, Q Zou - Briefings in Bioinformatics, 2022 - academic.oup.com
Targeted drugs have been applied to the treatment of cancer on a large scale, and some
patients have certain therapeutic effects. It is a time-consuming task to detect drug–target …

Application of Artificial Intelligence in Drug–Drug Interactions Prediction: A Review

Y Zhang, Z Deng, X Xu, Y Feng… - Journal of chemical …, 2023 - ACS Publications
Drug–drug interactions (DDI) are a critical aspect of drug research that can have adverse
effects on patients and can lead to serious consequences. Predicting these events …

[HTML][HTML] A review on compound-protein interaction prediction methods: data, format, representation and model

S Lim, Y Lu, CY Cho, I Sung, J Kim, Y Kim… - Computational and …, 2021 - Elsevier
There has recently been a rapid progress in computational methods for determining protein
targets of small molecule drugs, which will be termed as compound protein interaction (CPI) …