High‐throughput metagenomics for identification of pathogens in the clinical settings

N Li, Q Cai, Q Miao, Z Song, Y Fang, B Hu - Small methods, 2021 - Wiley Online Library
The application of sequencing technology is shifting from research to clinical laboratories
owing to rapid technological developments and substantially reduced costs. However …

[HTML][HTML] Metagenomics next-generation sequencing tests take the stage in the diagnosis of lower respiratory tract infections

Z Diao, D Han, R Zhang, J Li - Journal of advanced research, 2022 - Elsevier
Background Metagenomic next-generation sequencing (mNGS) has changed the diagnosis
landscape of lower respiratory tract infections (LRIs). With the development of newer …

The diagnostic value of metagenomic next–generation sequencing in lower respiratory tract infection

Y Zheng, X Qiu, T Wang, J Zhang - Frontiers in cellular and infection …, 2021 - frontiersin.org
Lower respiratory tract infections are associated with high morbidity and mortality and
significant clinical harm. Due to the limited ability of traditional pathogen detection methods …

[HTML][HTML] Liquid biopsy for infectious diseases: a focus on microbial cell-free DNA sequencing

D Han, R Li, J Shi, P Tan, R Zhang, J Li - Theranostics, 2020 - ncbi.nlm.nih.gov
Metagenomic next-generation sequencing (mNGS) of microbial cell-free DNA (mcfDNA
sequencing) is becoming an attractive diagnostic modality for infectious diseases, allowing …

The effectiveness of metagenomic next-generation sequencing in the diagnosis of prosthetic joint infection: a systematic review and meta-analysis

J Tan, Y Liu, S Ehnert, AK Nüssler, Y Yu… - Frontiers in cellular …, 2022 - frontiersin.org
Background A prosthetic joint infection (PJI) is a devastating complication following total joint
arthroplasties with poor prognosis. Identifying an accurate and prompt diagnostic method is …

MBPD: A multiple bacterial pathogen detection pipeline for One Health practices

X Yang, G Jiang, Y Zhang, N Wang, Y Zhang, X Wang… - Imeta, 2023 - Wiley Online Library
Bacterial pathogens are one of the major threats to biosafety and environmental health, and
advanced assessment is a prerequisite to combating bacterial pathogens. Currently, 16S …

Diagnostic value of metagenomic next-generation sequencing for the detection of pathogens in bronchoalveolar lavage fluid in ventilator-associated pneumonia …

X Fang, Q Mei, X Fan, C Zhu, T Yang, L Zhang… - Frontiers in …, 2020 - frontiersin.org
Objective: To evaluate the diagnostic performance of metagenomic next-generation
sequencing (mNGS) using bronchoalveolar lavage fluid (BALF) in patients with ventilator …

Emerging contaminants: a One Health perspective

F Wang, L Xiang, KSY Leung, M Elsner, Y Zhang… - The Innovation, 2024 - cell.com
Environmental pollution is escalating due to rapid global development that often prioritizes
human needs over planetary health. Despite global efforts to mitigate legacy pollutants, the …

[HTML][HTML] High-throughput sequencing technologies in the detection of livestock pathogens, diagnosis, and zoonotic surveillance

GGD Suminda, S Bhandari, Y Won, U Goutam… - Computational and …, 2022 - Elsevier
Increasing globalization, agricultural intensification, urbanization, and climatic changes have
resulted in a significant recent increase in emerging infectious zoonotic diseases. Zoonotic …

[HTML][HTML] Metagenomic next-generation sequencing for accurate diagnosis and management of lower respiratory tract infections

M Liang, Y Fan, D Zhang, L Yang, X Wang… - International Journal of …, 2022 - Elsevier
Objectives This study aimed to evaluate the clinical value of metagenomic next-generation
sequencing (mNGS) in patients with suspected lower respiratory tract infections. Methods …