[HTML][HTML] The bacterial pangenome as a new tool for analysing pathogenic bacteria

L Rouli, V Merhej, PE Fournier, D Raoult - New microbes and new …, 2015 - Elsevier
The bacterial pangenome was introduced in 2005 and, in recent years, has been the subject
of many studies. Thanks to progress in next-generation sequencing methods, the …

Horizontally transferred genetic elements and their role in pathogenesis of bacterial disease

C Gyles, P Boerlin - Veterinary pathology, 2014 - journals.sagepub.com
This article reviews the roles that laterally transferred genes (LTG) play in the virulence of
bacterial pathogens. The features of LTG that allow them to be recognized in bacterial …

[HTML][HTML] The chicken gut metagenome and the modulatory effects of plant-derived benzylisoquinoline alkaloids

P Huang, Y Zhang, K Xiao, F Jiang, H Wang, D Tang… - Microbiome, 2018 - Springer
Background Sub-therapeutic antibiotics are widely used as growth promoters in the poultry
industry; however, the resulting antibiotic resistance threatens public health. A plant-derived …

[图书][B] Practical handbook of microbiology

LH Green, E Goldman - 2021 - books.google.com
Practical Handbook of Microbiology, 4th edition provides basic, clear and concise
knowledge and practical information about working with microorganisms. Useful to anyone …

[PDF][PDF] A reverse ecology approach based on a biological definition of microbial populations

P Arevalo, D VanInsberghe, J Elsherbini, J Gore… - Cell, 2019 - cell.com
Delineating ecologically meaningful populations among microbes is important for identifying
their roles in environmental and host-associated microbiomes. Here, we introduce a metric …

First steps in the analysis of prokaryotic pan-genomes

SS Costa, LC Guimarães, A Silva… - … and Biology Insights, 2020 - journals.sagepub.com
Pan-genome is defined as the set of orthologous and unique genes of a specific group of
organisms. The pan-genome is composed by the core genome, accessory genome, and …

[HTML][HTML] Insight of Genus Corynebacterium: Ascertaining the Role of Pathogenic and Non-pathogenic Species

A Oliveira, LC Oliveira, F Aburjaile… - Frontiers in …, 2017 - frontiersin.org
This review gathers recent information about genomic and transcriptomic studies in the
Corynebacterium genus, exploring, for example, prediction of pathogenicity islands and …

Inside the pan-genome-methods and software overview

L Carlos Guimaraes, L Benevides de Jesus… - Current …, 2015 - ingentaconnect.com
The number of genomes that have been deposited in databases has increased
exponentially after the advent of Next-Generation Sequencing (NGS), which produces high …

Pan-genome analysis of Aeromonas hydrophila, Aeromonas veronii and Aeromonas caviae indicates phylogenomic diversity and greater pathogenic potential for …

S Ghatak, J Blom, S Das, R Sanjukta, K Puro… - Antonie Van …, 2016 - Springer
Aeromonas species are important pathogens of fishes and aquatic animals capable of
infecting humans and other animals via food. Due to the paucity of pan-genomic studies on …

[HTML][HTML] Pangenome analysis of Corynebacterium striatum: insights into a neglected multidrug-resistant pathogen

WM Nageeb, HF Hetta - BMC microbiology, 2023 - Springer
Background Over the past two decades, Corynebacterium striatum has been increasingly
isolated from clinical cultures with most isolates showing increased antimicrobial resistance …