Background Inflammatory bowel disease (IBD) is a gastrointestinal chronic disease with an
unpredictable disease course. Computational methods such as machine learning (ML) have …

Short-chain fatty acids (SCFAs) including acetate, formate, propionate, and butyrate are the
end products of dietary fiber and host glycan fermentation by the human gut microbiota …

Background Early diagnosis and treatment of pediatric Inflammatory bowel disease (PIBD) is
challenging due to the complexity of the disease and lack of disease specific biomarkers …

The human gut microbiota (HGM) have an impact on host health and disease. Amino acids
are building blocks of proteins and peptides, also serving as precursors of many essential …

The community structure and metabolic potential of gut microbiome is not well investigated,
especially in chronically critically ill patients with prolonged dependence on support systems …

Linking microbiome composition obtained from metagenomic or 16S rRNA sequencing to
various factors poses a real challenge. The compositional approach to such data is well …

The profiling of 16S rRNA revolutionized the exploration of microbiomes, allowing to
describe community composition by enumerating relevant taxa and their abundances …

The makeup of human microbiota has been linked to a number of autoimmune disorders.
Recent developments in whole metagenome sequencing and 16S rRNA sequencing …

The aim of the work is to assess biological properties of the enteroaggregative Escherichia
coli (EAgEC) strain isolated from the colon mucosa biopsy material from a patient with …

When I started this journey, the gut microbiomes contribution to IBD was poorly understood
and was the big unknown. Since then there have been substantial advances in filling …