Improving detection of copy-number variation by simultaneous bias correction and read-depth segmentation

JP Szatkiewicz, WB Wang, PF Sullivan… - Nucleic acids …, 2013 - academic.oup.com
Structural variation is an important class of genetic variation in mammals. High-throughput
sequencing (HTS) technologies promise to revolutionize copy-number variation (CNV) …

Gene copy number variations in adaptive evolution: the genomic distribution of gene copy number variations revealed by genetic mapping and their adaptive role in …

J Prunier, S Caron, M Lamothe, S Blais… - Molecular …, 2017 - Wiley Online Library
Gene copy number variation (CNV) has been associated with phenotypic variability in
animals and plants, but a genomewide understanding of their impacts on phenotypes is …

[HTML][HTML] Structural variant landscapes reveal convergent signatures of evolution in sheep and goats

J Yang, DF Wang, JH Huang… - Genome …, 2024 - genomebiology.biomedcentral.com
Sheep and goats have undergone domestication and improvement to produce similar
phenotypes, which have been greatly impacted by structural variants (SVs). Here, we report …

A genome-wide scan of copy number variants using high-density SNPs in Brown Swiss dairy cattle

R Prinsen, MG Strillacci, F Schiavini, E Santus… - Livestock Science, 2016 - Elsevier
Detecting genetic variation such as Copy Number Variants (CNVs) in cattle provides the
opportunity to study their association with quantitative traits. CNVs are DNA sequences of 50 …

CNVs with adaptive potential in Rangifer tarandus: genome architecture and new annotated assembly

J Prunier, A Carrier, I Gilbert, W Poisson… - Life Science …, 2022 - life-science-alliance.org
Rangifer tarandus has experienced recent drastic population size reductions throughout its
circumpolar distribution and preserving the species implies genetic diversity conservation …

[HTML][HTML] Identification of the genetic characteristics of copy number variations in experimental specific pathogen-free ducks using whole-genome resequencing

L Li, J Quan, H Liu, H Yu, H Chen, C Xia, S Zhao… - BMC genomics, 2024 - Springer
Background Specific pathogen-free ducks are a valuable laboratory resource for waterfowl
disease research and poultry vaccine development. High throughput sequencing allows the …

[HTML][HTML] First genome-wide CNV mapping in FELIS CATUS using next generation sequencing data

F Genova, M Longeri, LA Lyons, A Bagnato… - BMC genomics, 2018 - Springer
Abstract Background Copy Number Variations (CNVs) have becoming very significant
variants, representing a major source of genomic variation. CNVs involvement in phenotypic …

[HTML][HTML] A genome-wide analysis of copy number variation in Murciano-Granadina goats

D Guan, A Martínez, A Castelló, V Landi… - Genetics Selection …, 2020 - Springer
Background In this work, our aim was to generate a map of the copy number variations
(CNV) segregating in a population of Murciano-Granadina goats, the most important dairy …

[HTML][HTML] Detection of copy number variation and selection signatures on the X chromosome in Chinese indigenous sheep with different types of tail

C Zhu, M Li, S Qin, F Zhao, S Fang - Asian-Australasian journal of …, 2020 - ncbi.nlm.nih.gov
Objective Chinese indigenous sheep breeds can be classified into the following three
categories by their tail morphology: fat-tailed, fat-rumped and thin-tailed sheep. The typical …

[PDF][PDF] Использование генетических методов на основе ДНК-маркеров продуктивных признаков в селекции кур

ЛГ Коршунова, РВ Карапетян - Птицеводство, 2021 - poultrypress.ru
Рассмотрены последние данные исследований по использованию в селекции
молекулярногенетических маркеров, связанных с продуктивными признаками кур …