Microtechnologies for single-cell and spatial multi-omics
Single-cell omics assays allow the identification of the type, subtype and functional state of a
single cell. To put such single-cell data in the context of tissues, spatially resolved omics can …
single cell. To put such single-cell data in the context of tissues, spatially resolved omics can …
[HTML][HTML] Advances in single-cell omics and multiomics for high-resolution molecular profiling
J Lim, C Park, M Kim, H Kim, J Kim… - Experimental & Molecular …, 2024 - nature.com
Single-cell omics technologies have revolutionized molecular profiling by providing high-
resolution insights into cellular heterogeneity and complexity. Traditional bulk omics …
resolution insights into cellular heterogeneity and complexity. Traditional bulk omics …
[HTML][HTML] Single-cell multi-omics and lineage tracing to dissect cell fate decision-making
L Haghverdi, LS Ludwig - Stem Cell Reports, 2023 - cell.com
The concept of cell fate relates to the future identity of a cell, and its daughters, which is
obtained via cell differentiation and division. Understanding, predicting, and manipulating …
obtained via cell differentiation and division. Understanding, predicting, and manipulating …
[HTML][HTML] Single-cell profiling of transcriptome and histone modifications with EpiDamID
Recent advances in single-cell sequencing technologies have enabled simultaneous
measurement of multiple cellular modalities, but the combined detection of histone post …
measurement of multiple cellular modalities, but the combined detection of histone post …
Quantifying common and distinct information in single-cell multimodal data with Tilted Canonical Correlation Analysis
Multimodal single-cell technologies profile multiple modalities for each cell simultaneously,
enabling a more thorough characterization of cell populations. Existing dimension-reduction …
enabling a more thorough characterization of cell populations. Existing dimension-reduction …
[HTML][HTML] Profiling chromatin regulatory landscape: insights into the development of ChIP-seq and ATAC-seq
S Ma, Y Zhang - Molecular biomedicine, 2020 - Springer
Chromatin regulatory landscape plays a critical role in many disease processes and embryo
development. Epigenome sequencing technologies such as chromatin immunoprecipitation …
development. Epigenome sequencing technologies such as chromatin immunoprecipitation …
Mapping cells through time and space with moscot
Single-cell genomics technologies enable multimodal profiling of millions of cells across
temporal and spatial dimensions. Experimental limitations prevent the measurement of all …
temporal and spatial dimensions. Experimental limitations prevent the measurement of all …
[HTML][HTML] Tracking cell-type-specific temporal dynamics in human and mouse brains
Z Lu, M Zhang, J Lee, A Sziraki, S Anderson, Z Zhang… - Cell, 2023 - cell.com
Progenitor cells are critical in preserving organismal homeostasis, yet their diversity and
dynamics in the aged brain remain underexplored. We introduced TrackerSci, a single-cell …
dynamics in the aged brain remain underexplored. We introduced TrackerSci, a single-cell …
Parallel bimodal single-cell sequencing of transcriptome and chromatin accessibility
Joint profiling of transcriptome and chromatin accessibility within single cells allows for the
deconstruction of the complex relationship between transcriptional states and upstream …
deconstruction of the complex relationship between transcriptional states and upstream …
[HTML][HTML] Single-cell multiomics decodes regulatory programs for mouse secondary palate development
Perturbations in gene regulation during palatogenesis can lead to cleft palate, which is
among the most common congenital birth defects. Here, we perform single-cell multiome …
among the most common congenital birth defects. Here, we perform single-cell multiome …