Addressing the challenge of biomedical data inequality: An artificial intelligence perspective

Y Gao, T Sharma, Y Cui - Annual review of biomedical data …, 2023 - annualreviews.org
Artificial intelligence (AI) and other data-driven technologies hold great promise to transform
healthcare and confer the predictive power essential to precision medicine. However, the …

The chromatin landscape of pathogenic transcriptional cell states in rheumatoid arthritis

K Weinand, S Sakaue, A Nathan, AH Jonsson… - Nature …, 2024 - nature.com
Synovial tissue inflammation is a hallmark of rheumatoid arthritis (RA). Recent work has
identified prominent pathogenic cell states in inflamed RA synovial tissue, such as T …

Week-Old Chicks with High Bacteroides Abundance Have Increased Short-Chain Fatty Acids and Reduced Markers of Gut Inflammation

Y Fan, T Ju, T Bhardwaj, DR Korver… - Microbiology …, 2023 - Am Soc Microbiol
As important commensals in the chicken intestine, Bacteroides are essential complex
carbohydrate degraders, and short-chain fatty acid (SCFA) producers that are highly …

Moonlighting Arabidopsis molybdate transporter 2 family and GSH-complex formation facilitate molybdenum homeostasis

JN Weber, R Minner-Meinen, M Behnecke… - Communications …, 2023 - nature.com
Molybdenum (Mo) as essential micronutrient for plants, acts as active component of
molybdenum cofactor (Moco). Core metabolic processes like nitrate assimilation or abscisic …

Genome-wide association study of long COVID

V Lammi, T Nakanishi, SE Jones, SJ Andrews… - medRxiv, 2023 - medrxiv.org
Infections can lead to persistent or long-term symptoms and diseases such as shingles after
varicella zoster, cancers after human papillomavirus, or rheumatic fever after streptococcal …

[PDF][PDF] Architecture of the outbred brown fat proteome defines regulators of metabolic physiology

H Xiao, LHM Bozi, Y Sun, CL Riley, VM Philip, M Chen… - Cell, 2022 - cell.com
Brown adipose tissue (BAT) regulates metabolic physiology. However, nearly all
mechanistic studies of BAT protein function occur in a single inbred mouse strain, which has …

Benchmarking strategies for cross-species integration of single-cell RNA sequencing data

Y Song, Z Miao, A Brazma, I Papatheodorou - Nature Communications, 2023 - nature.com
The growing number of available single-cell gene expression datasets from different species
creates opportunities to explore evolutionary relationships between cell types across …

Lineage Landscape: a comprehensive database that records lineage commitment across species

H Yan, R Wang, S Ma, D Huang, S Wang… - Nucleic Acids …, 2023 - academic.oup.com
Commitment to specific cell lineages is critical for mammalian embryonic development.
Lineage determination, differentiation, maintenance, and organogenesis result in diverse life …

Cell Taxonomy: a curated repository of cell types with multifaceted characterization

S Jiang, Q Qian, T Zhu, W Zong, Y Shang… - Nucleic Acids …, 2023 - academic.oup.com
Single-cell studies have delineated cellular diversity and uncovered increasing numbers of
previously uncharacterized cell types in complex tissues. Thus, synthesizing growing …

Co-translational binding of importins to nascent proteins

M Seidel, N Romanov, A Obarska-Kosinska… - Nature …, 2023 - nature.com
Various cellular quality control mechanisms support proteostasis. While, ribosome-
associated chaperones prevent the misfolding of nascent chains during translation …