Tangled up in two: a burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution

K Vanneste, S Maere… - … Transactions of the …, 2014 - royalsocietypublishing.org
Genome sequencing has demonstrated that besides frequent small-scale duplications, large-
scale duplication events such as whole genome duplications (WGDs) are found on many …

Combining phylogenomic and supermatrix approaches, and a time-calibrated phylogeny for squamate reptiles (lizards and snakes) based on 52 genes and 4162 …

Y Zheng, JJ Wiens - Molecular phylogenetics and evolution, 2016 - Elsevier
Two common approaches for estimating phylogenies in species-rich groups are to:(i)
sample many loci for few species (eg phylogenomic approach), or (ii) sample many species …

A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes

RA Pyron, FT Burbrink, JJ Wiens - BMC evolutionary biology, 2013 - Springer
Background The extant squamates (> 9400 known species of lizards and snakes) are one of
the most diverse and conspicuous radiations of terrestrial vertebrates, but no studies have …

[HTML][HTML] The tree of life and a new classification of bony fishes

R Betancur-R, RE Broughton, EO Wiley… - PLoS …, 2013 - ncbi.nlm.nih.gov
The tree of life of fishes is in a state of flux because we still lack a comprehensive phylogeny
that includes all major groups. The situation is most critical for a large clade of spiny-finned …

Interrogating genomic-scale data for Squamata (lizards, snakes, and amphisbaenians) shows no support for key traditional morphological relationships

FT Burbrink, FG Grazziotin, RA Pyron… - Systematic …, 2020 - academic.oup.com
Genomics is narrowing uncertainty in the phylogenetic structure for many amniote groups.
For one of the most diverse and species-rich groups, the squamate reptiles (lizards, snakes …

Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous–Paleogene boundary

K Vanneste, G Baele, S Maere… - Genome research, 2014 - genome.cshlp.org
Ancient whole-genome duplications (WGDs), also referred to as paleopolyploidizations,
have been reported in most evolutionary lineages. Their attributed role remains a major …

Integrated analyses resolve conflicts over squamate reptile phylogeny and reveal unexpected placements for fossil taxa

TW Reeder, TM Townsend, DG Mulcahy, BP Noonan… - PLOS …, 2015 - journals.plos.org
Squamate reptiles (lizards and snakes) are a pivotal group whose relationships have
become increasingly controversial. Squamates include> 9000 species, making them the …

Early origin of viviparity and multiple reversions to oviparity in squamate reptiles

RA Pyron, FT Burbrink - Ecology letters, 2014 - Wiley Online Library
Viviparity has putatively evolved 115 times in squamates (lizards and snakes), out of only~
140 origins in vertebrates, and is apparently related to colder climates and other factors such …

[图书][B] Molecular evolution: a statistical approach

Z Yang - 2014 - books.google.com
Studies of evolution at the molecular level have experienced phenomenal growth in the last
few decades, due to rapid accumulation of genetic sequence data, improved computer …

A Phylogenetic, Biogeographic, and Taxonomic study of all Extant Species of Anolis (Squamata; Iguanidae)

S Poe, A Nieto-Montes de Oca… - Systematic …, 2017 - academic.oup.com
Anolis lizards (anoles) are textbook study organisms in evolution and ecology. Although
several topics in evolutionary biology have been elucidated by the study of anoles, progress …