Chromatin replication and epigenetic cell memory
Propagation of the chromatin landscape across cell divisions is central to epigenetic cell
memory. Mechanistic analysis of the interplay between DNA replication, the cell cycle, and …
memory. Mechanistic analysis of the interplay between DNA replication, the cell cycle, and …
The code and beyond: transcription regulation by the RNA polymerase II carboxy-terminal domain
KM Harlen, LS Churchman - Nature reviews Molecular cell biology, 2017 - nature.com
The carboxy-terminal domain (CTD) extends from the largest subunit of RNA polymerase II
(Pol II) as a long, repetitive and largely unstructured polypeptide chain. Throughout the …
(Pol II) as a long, repetitive and largely unstructured polypeptide chain. Throughout the …
Histone exchange, chromatin structure and the regulation of transcription
S Venkatesh, JL Workman - Nature reviews Molecular cell biology, 2015 - nature.com
The packaging of DNA into strings of nucleosomes is one of the features that allows
eukaryotic cells to tightly regulate gene expression. The ordered disassembly of …
eukaryotic cells to tightly regulate gene expression. The ordered disassembly of …
Structural basis of nucleosome retention during transcription elongation
In eukaryotes, RNA polymerase (Pol) II transcribes chromatin and must move past
nucleosomes, often resulting in nucleosome displacement. How Pol II unwraps the DNA …
nucleosomes, often resulting in nucleosome displacement. How Pol II unwraps the DNA …
Homocysteine modification in protein structure/function and human disease
H Jakubowski - Physiological reviews, 2019 - journals.physiology.org
Epidemiological studies established that elevated homocysteine, an important intermediate
in folate, vitamin B12, and one carbon metabolism, is associated with poor health, including …
in folate, vitamin B12, and one carbon metabolism, is associated with poor health, including …
Post-translational modifications of histones that influence nucleosome dynamics
GD Bowman, MG Poirier - Chemical reviews, 2014 - ACS Publications
Nucleosomes are efficient DNA-packaging units. The fundamental protein unit of the
nucleosome is the histone dimer, a simple α-helical domain possessing a highly basic …
nucleosome is the histone dimer, a simple α-helical domain possessing a highly basic …
The genetics of transcription factor DNA binding variation
Most complex trait-associated variants are located in non-coding regulatory regions of the
genome, where they have been shown to disrupt transcription factor (TF)-DNA binding …
genome, where they have been shown to disrupt transcription factor (TF)-DNA binding …
Histone sumoylation and chromatin dynamics
HY Ryu, M Hochstrasser - Nucleic Acids Research, 2021 - academic.oup.com
Chromatin structure and gene expression are dynamically controlled by post-translational
modifications (PTMs) on histone proteins, including ubiquitylation, methylation, acetylation …
modifications (PTMs) on histone proteins, including ubiquitylation, methylation, acetylation …
Transcription termination and the control of the transcriptome: why, where and how to stop
O Porrua, D Libri - Nature reviews Molecular cell biology, 2015 - nature.com
Transcription termination occurs when the polymerase is released after a transcription event,
thus delimitating transcription units; however, the functional importance of termination …
thus delimitating transcription units; however, the functional importance of termination …
Broad H3K4me3 is associated with increased transcription elongation and enhancer activity at tumor-suppressor genes
Tumor suppressors are mostly defined by inactivating mutations in tumors, yet little is known
about their epigenetic features in normal cells. Through integrative analysis of 1,134 …
about their epigenetic features in normal cells. Through integrative analysis of 1,134 …