Genome triplication drove the diversification of Brassica plants

F Cheng, J Wu, X Wang - Horticulture research, 2014 - academic.oup.com
The genus Brassica belongs to the plant family Brassicaceae, which includes many
important crop species that are used as oilseed, condiments, or vegetables throughout the …

Miniature Inverted-Repeat Transposable Elements: Small DNA Transposons That Have Contributed to Plant MICRORNA Gene Evolution

JL Pegler, JMJ Oultram, CWG Mann, BJ Carroll… - Plants, 2023 - mdpi.com
Angiosperms form the largest phylum within the Plantae kingdom and show remarkable
genetic variation due to the considerable difference in the nuclear genome size of each …

Variation in abundance of predicted resistance genes in the Brassica oleracea pangenome

PE Bayer, AA Golicz, S Tirnaz… - Plant Biotechnology …, 2019 - Wiley Online Library
Brassica oleracea is an important agricultural species encompassing many vegetable crops
including cabbage, cauliflower, broccoli and kale; however, it can be susceptible to a variety …

Genotyping-by-sequencing map permits identification of clubroot resistance QTLs and revision of the reference genome assembly in cabbage (Brassica oleracea L.)

J Lee, NK Izzah, BS Choi, HJ Joh, SC Lee… - DNA …, 2016 - academic.oup.com
Clubroot is a devastating disease caused by Plasmodiophora brassicae and results in
severe losses of yield and quality in Brassica crops. Many clubroot resistance genes and …

Genome-wide SNP identification and QTL mapping for black rot resistance in cabbage

J Lee, NK Izzah, M Jayakodi, S Perumal, HJ Joh… - BMC plant biology, 2015 - Springer
Background Black rot is a destructive bacterial disease causing large yield and quality
losses in Brassica oleracea. To detect quantitative trait loci (QTL) for black rot resistance, we …

Genome-Wide Comparative Analysis of 20 Miniature Inverted-Repeat Transposable Element Families in Brassica rapa and B. oleracea

P Sampath, J Murukarthick, NK Izzah, J Lee, HI Choi… - PloS one, 2014 - journals.plos.org
Miniature inverted-repeat transposable elements (MITEs) are ubiquitous, non-autonomous
class II transposable elements. Here, we conducted genome-wide comparative analysis of …

[HTML][HTML] Identifying potential flavonoid biosynthesis regulator in Zanthoxylum bungeanum Maxim. by genome-wide characterization of the MYB transcription factor …

X Wang, T Lu, S Feng, A Wei - Journal of Integrative Agriculture, 2022 - Elsevier
Plant MYB transcription factors (TFs) play crucial roles in regulating the biosynthesis of
flavonoids but current analysis on their role in Zanthoxylum bungeanum Maxim.(ZBM) is far …

Miniature inverted-repeat transposable elements (MITEs), derived insertional polymorphism as a tool of marker systems for molecular plant breeding

Venkatesh, B Nandini - Molecular Biology Reports, 2020 - Springer
Plant molecular breeding is expected to give significant gains in cultivar development
through development and utilization of suitable molecular marker systems for genetic …

Elucidating the major hidden genomic components of the A, C, and AC genomes and their influence on Brassica evolution

S Perumal, NE Waminal, J Lee, J Lee, BS Choi… - Scientific reports, 2017 - nature.com
Decoding complete genome sequences is prerequisite for comprehensive genomics
studies. However, the currently available reference genome sequences of Brassica rapa (A …

Genome-wide identification and development of miniature inverted-repeat transposable elements and intron length polymorphic markers in tea plant (Camellia …

M Rohilla, A Mazumder, D Saha, T Pal, S Begam… - Scientific Reports, 2022 - nature.com
Marker-assisted breeding and tagging of important quantitative trait loci for beneficial traits
are two important strategies for the genetic improvement of plants. However, the scarcity of …