[HTML][HTML] Expanding omics resources for improvement of soybean seed composition traits
Food resources of the modern world are strained due to the increasing population. There is
an urgent need for innovative methods and approaches to augment food production …
an urgent need for innovative methods and approaches to augment food production …
Landscape of genomic diversity and trait discovery in soybean
Cultivated soybean [Glycine max (L.) Merr.] is a primary source of vegetable oil and protein.
We report a landscape analysis of genome-wide genetic variation and an association study …
We report a landscape analysis of genome-wide genetic variation and an association study …
Integration of omics approaches to understand oil/protein content during seed development in oilseed crops
Oilseed crops, especially soybean (Glycine max) and canola/rapeseed (Brassica napus),
produce seeds that are rich in both proteins and oils and that are major sources of energy …
produce seeds that are rich in both proteins and oils and that are major sources of energy …
New insights into Arabidopsis transcriptome complexity revealed by direct sequencing of native RNAs
Arabidopsis thaliana transcriptomes have been extensively studied and characterized under
different conditions. However, most of the current 'RNA-sequencing'technologies produce a …
different conditions. However, most of the current 'RNA-sequencing'technologies produce a …
PCSD: a plant chromatin state database
Y Liu, T Tian, K Zhang, Q You, H Yan… - Nucleic Acids …, 2018 - academic.oup.com
Genome-wide maps of chromatin states have become a powerful representation of genome
annotation and regulatory activity. We collected public and in-house plant epigenomic data …
annotation and regulatory activity. We collected public and in-house plant epigenomic data …
An evolutionary population structure model reveals pleiotropic effects of GmPDAT for traits related to seed size and oil content in soybean
JY Liu, YW Zhang, X Han, JF Zuo… - Journal of …, 2020 - academic.oup.com
Seed oil traits in soybean that are of benefit to human nutrition and health have been
selected for during crop domestication. However, these domesticated traits have significant …
selected for during crop domestication. However, these domesticated traits have significant …
PlantGSAD: a comprehensive gene set annotation database for plant species
X Ma, H Yan, J Yang, Y Liu, Z Li, M Sheng… - Nucleic Acids …, 2022 - academic.oup.com
With the accumulation of massive data sets from high-throughput experiments and the rapid
emergence of new types of omics data, gene sets have become more diverse and essential …
emergence of new types of omics data, gene sets have become more diverse and essential …
Selection for a zinc-finger protein contributes to seed oil increase during soybean domestication
Seed oil is a momentous agronomical trait of soybean (Glycine max) targeted by
domestication in breeding. Although multiple oil-related genes have been uncovered …
domestication in breeding. Although multiple oil-related genes have been uncovered …
Co-expression gene network analysis and functional module identification in bamboo growth and development
X Ma, H Zhao, W Xu, Q You, H Yan, Z Gao… - Frontiers in genetics, 2018 - frontiersin.org
Bamboo is one of the fastest-growing non-timber forest plants. Moso bamboo (Phyllostachys
edulis) is the most economically valuable bamboo in Asia, especially in China. With the …
edulis) is the most economically valuable bamboo in Asia, especially in China. With the …
ccNET: Database of co-expression networks with functional modules for diploid and polyploid Gossypium
Q You, W Xu, K Zhang, L Zhang, X Yi… - Nucleic acids …, 2017 - academic.oup.com
Plant genera with both diploid and polyploid species are a common evolutionary
occurrence. Polyploids, especially allopolyploids such as cotton and wheat, are a great …
occurrence. Polyploids, especially allopolyploids such as cotton and wheat, are a great …