How RNA-binding proteins interact with RNA: molecules and mechanisms

M Corley, MC Burns, GW Yeo - Molecular cell, 2020 - cell.com
RNA-binding proteins (RBPs) comprise a large class of over 2,000 proteins that interact with
transcripts in all manner of RNA-driven processes. The structures and mechanisms that …

RNA-binding proteins in immune regulation: a focus on CCCH zinc finger proteins

M Fu, PJ Blackshear - Nature Reviews Immunology, 2017 - nature.com
Nearly 60 CCCH zinc finger proteins have been identified in humans and mice. These
proteins are involved in the regulation of multiple steps of RNA metabolism, including mRNA …

In vivo reconstitution finds multivalent RNA–RNA interactions as drivers of mesh-like condensates

W Ma, G Zhen, W Xie, C Mayr - Elife, 2021 - elifesciences.org
Liquid-like condensates have been thought to be sphere-like. Recently, various
condensates with filamentous morphology have been observed in cells. One such …

Protein design: toward functional metalloenzymes

F Yu, VM Cangelosi, ML Zastrow, M Tegoni… - Chemical …, 2014 - ACS Publications
Protein design is a valuable tool for understanding the fundamental factors that dictate
protein structure and function. The field of protein design has seen significant progress over …

Cancer the 'RBP'eutics–RNA-binding proteins as therapeutic targets for cancer

S Mohibi, X Chen, J Zhang - Pharmacology & therapeutics, 2019 - Elsevier
RNA-binding proteins (RBPs) play a critical role in the regulation of various RNA processes,
including splicing, cleavage and polyadenylation, transport, translation and degradation of …

RNA-binding proteins: modular design for efficient function

BM Lunde, C Moore, G Varani - Nature reviews Molecular cell biology, 2007 - nature.com
Many RNA-binding proteins have modular structures and are composed of multiple repeats
of just a few basic domains that are arranged in various ways to satisfy their diverse …

Extensive and divergent circadian gene expression in liver and heart

KF Storch, O Lipan, I Leykin, N Viswanathan, FC Davis… - Nature, 2002 - nature.com
Many mammalian peripheral tissues have circadian clocks,,,; endogenous oscillators that
generate transcriptional rhythms thought to be important for the daily timing of physiological …

RNA regulons: coordination of post-transcriptional events

JD Keene - Nature Reviews Genetics, 2007 - nature.com
Recent findings demonstrate that multiple mRNAs are co-regulated by one or more
sequence-specific RNA-binding proteins that orchestrate their splicing, export, stability …

Tristetraprolin (TTP): interactions with mRNA and proteins, and current thoughts on mechanisms of action

SA Brooks, PJ Blackshear - Biochimica et Biophysica Acta (BBA)-Gene …, 2013 - Elsevier
Changes in mRNA stability and translation are critical control points in the regulation of gene
expression, particularly genes encoding growth factors, inflammatory mediators, and proto …

AU-rich elements and associated factors: are there unifying principles?

C Barreau, L Paillard, HB Osborne - Nucleic acids research, 2005 - academic.oup.com
The control of mRNA stability is an important process that allows cells to not only limit, but
also rapidly adjust, the expression of regulatory factors whose over expression may be …