A pragmatic guide to enrichment strategies for mass spectrometry–based glycoproteomics
Glycosylation is a prevalent, yet heterogeneous modification with a broad range of
implications in molecular biology. This heterogeneity precludes enrichment strategies that …
implications in molecular biology. This heterogeneity precludes enrichment strategies that …
Towards structure-focused glycoproteomics
A Chernykh, R Kawahara… - Biochemical Society …, 2021 - portlandpress.com
Facilitated by advances in the separation sciences, mass spectrometry and informatics,
glycoproteomics, the analysis of intact glycopeptides at scale, has recently matured enabling …
glycoproteomics, the analysis of intact glycopeptides at scale, has recently matured enabling …
Optimal Dissociation Methods Differ for N- and O-Glycopeptides
NM Riley, SA Malaker, MD Driessen… - Journal of proteome …, 2020 - ACS Publications
Site-specific characterization of glycosylation requires intact glycopeptide analysis, and
recent efforts have focused on how to best interrogate glycopeptides using tandem mass …
recent efforts have focused on how to best interrogate glycopeptides using tandem mass …
In-depth site-specific analysis of N-glycoproteome in human cerebrospinal fluid and glycosylation landscape changes in Alzheimer's disease
As the body fluid that directly interchanges with the extracellular fluid of the central nervous
system (CNS), cerebrospinal fluid (CSF) serves as a rich source for CNS-related disease …
system (CNS), cerebrospinal fluid (CSF) serves as a rich source for CNS-related disease …
Peak filtering, peak annotation, and wildcard search for glycoproteomics
Glycopeptides in peptide or digested protein samples pose a number of analytical and
bioinformatics challenges beyond those posed by unmodified peptides or peptides with …
bioinformatics challenges beyond those posed by unmodified peptides or peptides with …
In-depth site-specific O-glycosylation analysis of glycoproteins and endogenous peptides in cerebrospinal fluid (CSF) from healthy individuals, mild cognitive …
Site-specific O-glycoproteome mapping in complex biological systems provides a molecular
basis for understanding the structure–function relationships of glycoproteins and their roles …
basis for understanding the structure–function relationships of glycoproteins and their roles …
Biological mass spectrometry enables spatiotemporal 'omics: From tissues to cells to organelles
LR Pade, KE Stepler, EP Portero… - Mass spectrometry …, 2024 - Wiley Online Library
Biological processes unfold across broad spatial and temporal dimensions, and
measurement of the underlying molecular world is essential to their understanding …
measurement of the underlying molecular world is essential to their understanding …
Recent advances in mass spectrometry analysis of neuropeptides
A Phetsanthad, NQ Vu, Q Yu… - Mass spectrometry …, 2023 - Wiley Online Library
Due to their involvement in numerous biochemical pathways, neuropeptides have been the
focus of many recent research studies. Unfortunately, classic analytical methods, such as …
focus of many recent research studies. Unfortunately, classic analytical methods, such as …
Enrichment and fragmentation approaches for enhanced detection and characterization of endogenous glycosylated neuropeptides
A Phetsanthad, C Roycroft, L Li - Proteomics, 2023 - Wiley Online Library
Glycosylated neuropeptides were recently discovered in crustaceans, a model organism
with a well‐characterized neuroendocrine system. Several workflows exist to characterize …
with a well‐characterized neuroendocrine system. Several workflows exist to characterize …
Mapping the O-GlcNAc modified proteome: applications for health and disease
RA Burt, IM Alghusen, S John Ephrame… - Frontiers in Molecular …, 2022 - frontiersin.org
O-GlcNAc is a pleotropic, enigmatic post-translational modification (PTM). This PTM modifies
thousands of proteins differentially across tissue types and regulates diverse cellular …
thousands of proteins differentially across tissue types and regulates diverse cellular …