Mechanisms and concepts in RNA virus population dynamics and evolution
PT Dolan, ZJ Whitfield, R Andino - Annual Review of Virology, 2018 - annualreviews.org
RNA viruses are unique in their evolutionary capacity, exhibiting high mutation rates and
frequent recombination. They rapidly adapt to environmental changes, such as shifts in …
frequent recombination. They rapidly adapt to environmental changes, such as shifts in …
[HTML][HTML] BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
R Bouckaert, TG Vaughan… - PLoS computational …, 2019 - journals.plos.org
Elaboration of Bayesian phylogenetic inference methods has continued at pace in recent
years with major new advances in nearly all aspects of the joint modelling of evolutionary …
years with major new advances in nearly all aspects of the joint modelling of evolutionary …
Language trees with sampled ancestors support a hybrid model for the origin of Indo-European languages
P Heggarty, C Anderson, M Scarborough, B King… - Science, 2023 - science.org
The origins of the Indo-European language family are hotly disputed. Bayesian phylogenetic
analyses of core vocabulary have produced conflicting results, with some supporting a …
analyses of core vocabulary have produced conflicting results, with some supporting a …
Paleomicrobiology: diagnosis and evolution of ancient pathogens
The last century has witnessed progress in the study of ancient infectious disease from
purely medical descriptions of past ailments to dynamic interpretations of past population …
purely medical descriptions of past ailments to dynamic interpretations of past population …
A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
Although reconstruction of the phylogeny of living birds has progressed tremendously in the
last decade, the evolutionary history of Neoaves—a clade that encompasses nearly all living …
last decade, the evolutionary history of Neoaves—a clade that encompasses nearly all living …
[HTML][HTML] bModelTest: Bayesian phylogenetic site model averaging and model comparison
RR Bouckaert, AJ Drummond - BMC evolutionary biology, 2017 - Springer
Abstract Background Reconstructing phylogenies through Bayesian methods has many
benefits, which include providing a mathematically sound framework, providing realistic …
benefits, which include providing a mathematically sound framework, providing realistic …
Deformed wing virus is a recent global epidemic in honeybees driven by Varroa mites
L Wilfert, G Long, HC Leggett, P Schmid-Hempel… - Science, 2016 - science.org
Deformed wing virus (DWV) and its vector, the mite Varroa destructor, are a major threat to
the world's honeybees. Although the impact of Varroa on colony-level DWV epidemiology is …
the world's honeybees. Although the impact of Varroa on colony-level DWV epidemiology is …
Recent origin and rapid speciation of Neotropical orchids in the world's richest plant biodiversity hotspot
OA Pérez‐Escobar, G Chomicki… - New …, 2017 - Wiley Online Library
Summary The Andean mountains of South America are the most species‐rich biodiversity
hotspot worldwide with c. 15% of the world's plant species, in only 1% of the world's land …
hotspot worldwide with c. 15% of the world's plant species, in only 1% of the world's land …
[HTML][HTML] Genomic surveillance uncovers a pandemic clonal lineage of the wheat blast fungus
Wheat, one of the most important food crops, is threatened by a blast disease pandemic.
Here, we show that a clonal lineage of the wheat blast fungus recently spread to Asia and …
Here, we show that a clonal lineage of the wheat blast fungus recently spread to Asia and …
Evolution of lacewings and allied orders using anchored phylogenomics (N europtera, M egaloptera, R aphidioptera)
Abstract Analysis of anchored hybrid enrichment (AHE) data under a variety of analytical
parameters for a broadly representative sample of taxa (136 species representing all extant …
parameters for a broadly representative sample of taxa (136 species representing all extant …