Genome-wide association studies for common diseases and complex traits

JN Hirschhorn, MJ Daly - Nature reviews genetics, 2005 - nature.com
Genetic factors strongly affect susceptibility to common diseases and also influence disease-
related quantitative traits. Identifying the relevant genes has been difficult, in part because …

Biomarkers of cardiovascular disease: molecular basis and practical considerations

RS Vasan - Circulation, 2006 - Am Heart Assoc
echocardiogram) may be expected to facilitate the identification of patients with chest pain of
an ischemic etiology (angina). In a patient presenting to the emergency department with …

Efficiency and power in genetic association studies

PIW De Bakker, R Yelensky, I Pe'er, SB Gabriel… - Nature …, 2005 - nature.com
We investigated selection and analysis of tag SNPs for genome-wide association studies by
specifically examining the relationship between investment in genotyping and statistical …

Linkage disequilibrium and association studies in higher plants: present status and future prospects

PK Gupta, S Rustgi, PL Kulwal - Plant molecular biology, 2005 - Springer
During the last two decades, DNA-based molecular markers have been extensively utilized
for a variety of studies in both plant and animal systems. One of the major uses of these …

The role of haplotypes in candidate gene studies

AG Clark - Genetic Epidemiology: The Official Publication of the …, 2004 - Wiley Online Library
Human geneticists working on systems for which it is possible to make a strong case for a
set of candidate genes face the problem of whether it is necessary to consider the variation …

Assessment of two flexible and compatible SNP genotyping platforms: TaqMan® SNP Genotyping Assays and the SNPlex™ Genotyping System

M Francisco, KD Lazaruk, MD Rhodes… - … Molecular Mechanisms of …, 2005 - Elsevier
In this review we describe the principles, protocols, and applications of two commercially
available SNP genotyping platforms, the TaqMan® SNP Genotyping Assays and the …

Applications of linkage disequilibrium and association mapping in crop plants

ES Ersoz, J Yu, ES Buckler - Genomics-Assisted Crop Improvement: Vol. 1 …, 2007 - Springer
The investigations of patterns of linkage disequilibrium for designing associationmapping
studies are fast becoming a method of interest for complex trait dissection and improvement …

Using high-throughput SNP technologies to study cancer

LJ Engle, CL Simpson, JE Landers - Oncogene, 2006 - nature.com
Identifying genes involved in the development of cancer is crucial to fully understanding
cancer biology, for developing novel therapeutics for cancer treatment and for providing …

Choosing SNPs using feature selection

TM Phuong, Z Lin, RB Altman - 2005 IEEE Computational …, 2005 - ieeexplore.ieee.org
A major challenge for genomewide disease association studies is the high cost of
genotyping large number of single nucleotide polymorphisms (SNP). The correlations …

Applications of linkage disequilibrium and association mapping in maize

ES Ersoz, J Yu, ES Buckler - Molecular genetic approaches to maize …, 2009 - Springer
Association mapping, also known as linkage disequilibrium mapping, is a relatively new and
promising genetic method for complex trait dissection. Association map ping has the …