Single-cell RNA sequencing in cardiovascular development, disease and medicine

DT Paik, S Cho, L Tian, HY Chang… - Nature Reviews Cardiology, 2020 - nature.com
Advances in single-cell RNA sequencing (scRNA-seq) technologies in the past 10 years
have had a transformative effect on biomedical research, enabling the profiling and analysis …

[HTML][HTML] Single-cell RNA sequencing with spatial transcriptomics of cancer tissues

R Ahmed, T Zaman, F Chowdhury, F Mraiche… - International journal of …, 2022 - mdpi.com
Single-cell RNA sequencing (RNA-seq) techniques can perform analysis of transcriptome at
the single-cell level and possess an unprecedented potential for exploring signatures …

[PDF][PDF] Single-cell RNA-seq reveals cellular hierarchies and impaired developmental trajectories in pediatric ependymoma

J Gojo, B Englinger, L Jiang, JM Hübner, MKL Shaw… - Cancer cell, 2020 - cell.com
Ependymoma is a heterogeneous entity of central nervous system tumors with well-
established molecular groups. Here, we apply single-cell RNA sequencing to analyze …

Imipridones affect tumor bioenergetics and promote cell lineage differentiation in diffuse midline gliomas

JM Przystal, C Cianciolo Cosentino, S Yadavilli… - Neuro …, 2022 - academic.oup.com
Background Pediatric diffuse midline gliomas (DMGs) are incurable childhood cancers. The
imipridone ONC201 has shown early clinical efficacy in a subset of DMGs. However, the …

[PDF][PDF] Single-cell transcriptome analysis of regenerating RGCs reveals potent glaucoma neural repair genes

L Li, F Fang, X Feng, P Zhuang, H Huang, P Liu, L Liu… - Neuron, 2022 - cell.com
Axon regeneration holds great promise for neural repair of CNS axonopathies, including
glaucoma. Pten deletion in retinal ganglion cells (RGCs) promotes potent optic nerve …

[HTML][HTML] Fast and highly sensitive full-length single-cell RNA sequencing using FLASH-seq

V Hahaut, D Pavlinic, W Carbone, S Schuierer… - Nature …, 2022 - nature.com
We present FLASH-seq (FS), a full-length single-cell RNA sequencing (scRNA-seq) method
with increased sensitivity and reduced hands-on time compared to Smart-seq3. The entire …

[HTML][HTML] Cellular and molecular landscape of mammalian sinoatrial node revealed by single-cell RNA sequencing

D Liang, J Xue, L Geng, L Zhou, B Lv, Q Zeng… - Nature …, 2021 - nature.com
Bioelectrical impulses intrinsically generated within the sinoatrial node (SAN) trigger the
contraction of the heart in mammals. Though discovered over a century ago, the molecular …

[HTML][HTML] Identification of RAC1 in promoting brain metastasis of lung adenocarcinoma using single-cell transcriptome sequencing

M Chen, H Li, X Xu, X Bao, L Xue, X Ai, J Xu… - Cell Death & …, 2023 - nature.com
This study aims to give a new perspective to the biomarkers in the lung adenocarcinoma
(LUAD) brain metastasis, pathways involved and potential therapeutics. We performed a …

Allele-specific H3K9me3 and DNA methylation co-marked CpG-rich regions serve as potential imprinting control regions in pre-implantation embryo

H Yang, D Bai, Y Li, Z Yu, C Wang, Y Sheng, W Liu… - Nature cell …, 2022 - nature.com
Parental DNA methylation and histone modifications undergo distinct global reprogramming
in mammalian pre-implantation embryos, but the landscape of epigenetic crosstalk and its …

[HTML][HTML] Potent latency reversal by Tat RNA-containing nanoparticle enables multi-omic analysis of the HIV-1 reservoir

M Pardons, B Cole, L Lambrechts… - Nature …, 2023 - nature.com
The development of latency reversing agents that potently reactivate HIV without inducing
global T cell activation would benefit the field of HIV reservoir research and could pave the …