[HTML][HTML] Replication fork protection factors controlling R-loop bypass and suppression
EYC Chang, PC Stirling - Genes, 2017 - mdpi.com
Replication–transcription conflicts have been a well-studied source of genome instability for
many years and have frequently been linked to defects in RNA processing. However, recent …
many years and have frequently been linked to defects in RNA processing. However, recent …
[HTML][HTML] Clinical and mechanistic implications of R-loops in human leukemias
Genetic mutations or environmental agents are major contributors to leukemia and are
associated with genomic instability. R-loops are three-stranded nucleic acid structures …
associated with genomic instability. R-loops are three-stranded nucleic acid structures …
[HTML][HTML] Topoisomerase I plays a critical role in suppressing genome instability at a highly transcribed G-quadruplex-forming sequence
P Yadav, V Harcy, JL Argueso, M Dominska… - PLoS …, 2014 - journals.plos.org
G-quadruplex or G4 DNA is a non-B secondary DNA structure that comprises a stacked
array of guanine-quartets. Cellular processes such as transcription and replication can be …
array of guanine-quartets. Cellular processes such as transcription and replication can be …
[HTML][HTML] Yeast helicase Pif1 unwinds RNA: DNA hybrids with higher processivity than DNA: DNA duplexes
Saccharomyces cerevisiae Pif1, an SF1B helicase, has been implicated in both
mitochondrial and nuclear functions. Here we have characterized the preference of Pif1 for …
mitochondrial and nuclear functions. Here we have characterized the preference of Pif1 for …
Impaired dNKAP function drives genome instability and tumorigenic growth in Drosophila epithelia
T Guo, C Miao, Z Liu, J Duan, Y Ma… - Journal of Molecular …, 2023 - academic.oup.com
Mutations or dysregulated expression of NF-kappaB-activating protein (NKAP) family genes
have been found in human cancers. How NKAP family gene mutations promote tumor …
have been found in human cancers. How NKAP family gene mutations promote tumor …
[HTML][HTML] RNA polymerase III regulates cytosolic RNA: DNA hybrids and intracellular microRNA expression
CX Koo, K Kobiyama, YJ Shen, N LeBert… - Journal of Biological …, 2015 - ASBMB
RNA DNA hybrids form in the nuclei and mitochondria of cells as transcription-induced R-
loops or G-quadruplexes, but exist only in the cytosol of virus-infected cells. Little is known …
loops or G-quadruplexes, but exist only in the cytosol of virus-infected cells. Little is known …
RecBCD is required to complete chromosomal replication: Implications for double-strand break frequencies and repair mechanisms
J Courcelle, BM Wendel, DD Livingstone, CT Courcelle - DNA repair, 2015 - Elsevier
Several aspects of the mechanism of homologous double-strand break repair remain
unclear. Although intensive efforts have focused on how recombination reactions initiate, far …
unclear. Although intensive efforts have focused on how recombination reactions initiate, far …
The Top1 paradox: Friend and foe of the eukaryotic genome
N Kim, S Jinks-Robertson - DNA repair, 2017 - Elsevier
Topoisomerases manage the torsional stress associated with the separation of DNA strands
during transcription and DNA replication. Eukaryotic Topoisomerase I (Top1) is a Type IB …
during transcription and DNA replication. Eukaryotic Topoisomerase I (Top1) is a Type IB …
Genome-wide mapping reveals conserved and diverged R-loop activities in the unusual genetic landscape of the African trypanosome genome
R-loops are stable RNA–DNA hybrids that have been implicated in transcription initiation
and termination, as well as in telomere maintenance, chromatin formation, and genome …
and termination, as well as in telomere maintenance, chromatin formation, and genome …
New perspectives in cancer biology from a study of canonical and non-canonical functions of base excision repair proteins with a focus on early steps
MC Malfatti, G Antoniali, M Codrich, S Burra… - …, 2020 - academic.oup.com
Alterations of DNA repair enzymes and consequential triggering of aberrant DNA damage
response (DDR) pathways are thought to play a pivotal role in genomic instabilities …
response (DDR) pathways are thought to play a pivotal role in genomic instabilities …