Doubling down on genomes: polyploidy and crop plants

S Renny‐Byfield, JF Wendel - American journal of botany, 2014 - Wiley Online Library
Polyploidy, or whole genome multiplication, is ubiquitous among angiosperms. Many crop
species are relatively recent allopolyploids, resulting from interspecific hybridization and …

Evolution by gene duplication: an update

J Zhang - Trends in ecology & evolution, 2003 - cell.com
The importance of gene duplication in supplying raw genetic material to biological evolution
has been recognized since the 1930s. Recent genomic sequence data provide substantial …

PGDD: a database of gene and genome duplication in plants

TH Lee, H Tang, X Wang, AH Paterson - Nucleic acids research, 2012 - academic.oup.com
Genome duplication (GD) has permanently shaped the architecture and function of many
higher eukaryotic genomes. The angiosperms (flowering plants) are outstanding models in …

The genetics of Aspergillus nidulans

G Pontecorvo, JA Roper, LM Chemmons… - Advances in …, 1953 - Elsevier
Publisher Summary This discusses the lifecycle, the methods of culture, the isolation of
mutants, the formal genetics, the identification of loci, and the diploids and mitotic …

Genome evolution in polyploids

JF Wendel - Plant molecular evolution, 2000 - Springer
Polyploidy is a prominent process in plants and has been significant in the evolutionary
history of vertebrates and other eukaryotes. In plants, interdisciplinary approaches …

Duplication and divergence: the evolution of new genes and old ideas

JS Taylor, J Raes - Annu. Rev. Genet., 2004 - annualreviews.org
▪ Abstract Over 35 years ago, Susumu Ohno stated that gene duplication was the single
most important factor in evolution. He reiterated this point a few years later in proposing that …

Genome duplication, a trait shared by 22,000 species of ray-finned fish

JS Taylor, I Braasch, T Frickey, A Meyer… - Genome …, 2003 - genome.cshlp.org
Through phylogeny reconstruction we identified 49 genes with a single copy in man, mouse,
and chicken, one or two copies in the tetraploid frog Xenopus laevis, and two copies in …

Evolutionary genetics of genome merger and doubling in plants

JJ Doyle, LE Flagel, AH Paterson… - Annual review of …, 2008 - annualreviews.org
Polyploidy is a common mode of evolution in flowering plants. The profound effects of
polyploidy on gene expression appear to be caused more by hybridity than by genome …

Advances in the study of polyploidy since Plant speciation

DE Soltis, PS Soltis, JA Tate - New phytologist, 2004 - Wiley Online Library
Enormous strides have been made in the study of polyploidy over the last 20 yr. Here, we
highlight some of these discoveries and note where our understanding of polyploid …

Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing

KL Adams, R Cronn, R Percifield… - Proceedings of the …, 2003 - National Acad Sciences
Most eukaryotes have genomes that exhibit high levels of gene redundancy, much of which
seems to have arisen from one or more cycles of genome doubling. Polyploidy has been …