Codon usage bias and genetic diversity in chloroplast genomes of Elaeagnus species (Myrtiflorae: Elaeagnaceae)

C Li, L Zhou, J Nie, S Wu, W Li, Y Liu, Y Liu - Physiology and Molecular …, 2023 - Springer
Codon usage bias (CUB) reveals the characteristics of species and can be utilized to
understand their evolutionary relationship, increase the target genes' expression in the …

[HTML][HTML] Twelve newly assembled jasmine chloroplast genomes: unveiling genomic diversity, phylogenetic relationships and evolutionary patterns among Oleaceae …

X Xu, H Huang, S Lin, L Zhou, Y Yi, E Lin, L Feng… - BMC Plant …, 2024 - Springer
Jasmine (Jasminum), renowned for its ornamental value and captivating fragrance, has
given rise to numerous species and accessions. However, limited knowledge exists …

[HTML][HTML] Codon usage bias analysis in macronuclear genomes of ciliated protozoa

Y Fu, F Liang, C Li, A Warren, MK Shin, L Li - Microorganisms, 2023 - mdpi.com
Ciliated protozoa (ciliates) are unicellular eukaryotes, several of which are important model
organisms for molecular biology research. Analyses of codon usage bias (CUB) of the …

[HTML][HTML] Comparative Analysis of Chloroplast Genome of Meconopsis (Papaveraceae) Provides Insights into Their Genomic Evolution and Adaptation to High …

S Zhao, X Gao, X Yu, T Yuan, G Zhang, C Liu… - International Journal of …, 2024 - mdpi.com
The Meconopsis species are widely distributed in the Qinghai-Tibet Plateau, Himalayas, and
Hengduan Mountains in China, and have high medicinal and ornamental value. The high …

[HTML][HTML] Comparative Analysis of Chloroplast Genomes within Saxifraga (Saxifragaceae) Takes Insights into Their Genomic Evolution and Adaption to the High …

Z Chen, X Yu, Y Yang, P Wei, W Zhang, X Li, C Liu… - Genes, 2022 - mdpi.com
Saxifraga species are widely distributed in alpine and arctic regions in the Northern
hemisphere. Highly morphological diversity within this genus brings great difficulties for …

[HTML][HTML] The complete chloroplast genome of Hibiscus syriacus using long-read sequencing: Comparative analysis to examine the evolution of the tribe Hibisceae

H Koo, AY Shin, S Hong, YM Kim - Frontiers in Plant Science, 2023 - frontiersin.org
Hibiscus syriacus, a member of the tribe Hibisceae, is considered an important ornamental
and medicinal plant in east Asian countries. Here, we sequenced and assembled the …

The complete chloroplast genome of white towel gourd (Luffacylindrica) and phylogenetic analysis

Y Gong, Y Wei, G Zhou, Y Ou, C Zhang, P Li - Genetic Resources and …, 2024 - Springer
White towel gourd (Luffa cylindrica) is an important cultivated vegetable and economic plant
belong to the Cucurbitaceae family. In this study, the complete cp genome of L. cylindrica …

Codon usage bias analysis of the chloroplast genome of cassava

X Geng, N Huang, Y Zhu, L Qin, L Hui - South African Journal of Botany, 2022 - Elsevier
Chloroplast codon preference affects gene expression efficiency and is important for
chloroplast genetic engineering applications. Despite being the third most important food …

[HTML][HTML] Structural Characterization of Trivalvaria costata Chloroplast Genome and Molecular Evolution of rps12 Gene in Magnoliids

J Ping, X Zhong, T Wang, Y Su - Forests, 2023 - mdpi.com
Chloroplasts (cp) are important organelles in plant cells that have been widely used in
phylogenetic, molecular evolution, and gene expression studies due to their conserved …

[HTML][HTML] Highly active repeat-mediated recombination in the mitogenome of the aquatic grass Hygroryza aristata

H Wang, Z Wu, T Li, J Zhao - BMC Plant Biology, 2024 - Springer
Abstract Background Floating bamboo (Hygroryza aristata) is an endangered species with a
narrow native distribution and is renowned for its unique aesthetic qualities, which holds …