[HTML][HTML] Quantitative mapping of the brain's structural connectivity using diffusion MRI tractography: A review

F Zhang, A Daducci, Y He, S Schiavi, C Seguin… - Neuroimage, 2022 - Elsevier
Diffusion magnetic resonance imaging (dMRI) tractography is an advanced imaging
technique that enables in vivo reconstruction of the brain's white matter connections at …

Mapping structural connectivity using diffusion MRI: challenges and opportunities

CH Yeh, DK Jones, X Liang… - Journal of Magnetic …, 2021 - Wiley Online Library
Diffusion MRI‐based tractography is the most commonly‐used technique when inferring the
structural brain connectome, ie, the comprehensive map of the connections in the brain. The …

Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?

KG Schilling, F Rheault, L Petit, CB Hansen, V Nath… - Neuroimage, 2021 - Elsevier
White matter bundle segmentation using diffusion MRI fiber tractography has become the
method of choice to identify white matter fiber pathways in vivo in human brains. However …

Graph analysis of the human connectome: promise, progress, and pitfalls

A Fornito, A Zalesky, M Breakspear - Neuroimage, 2013 - Elsevier
The human brain is a complex, interconnected network par excellence. Accurate and
informative mapping of this human connectome has become a central goal of neuroscience …

SIFT: Spherical-deconvolution informed filtering of tractograms

RE Smith, JD Tournier, F Calamante, A Connelly - Neuroimage, 2013 - Elsevier
Diffusion MRI allows the structural connectivity of the whole brain (the 'tractogram') to be
estimated in vivo non-invasively using streamline tractography. The biological accuracy of …

Building connectomes using diffusion MRI: why, how and but

SN Sotiropoulos, A Zalesky - NMR in Biomedicine, 2019 - Wiley Online Library
Why has diffusion MRI become a principal modality for mapping connectomes in vivo? How
do different image acquisition parameters, fiber tracking algorithms and other …

The Virtual Brain: a simulator of primate brain network dynamics

P Sanz Leon, SA Knock, MM Woodman… - Frontiers in …, 2013 - frontiersin.org
We present The Virtual Brain (TVB), a neuroinformatics platform for full brain network
simulations using biologically realistic connectivity. This simulation environment enables the …

Connectome sensitivity or specificity: which is more important?

A Zalesky, A Fornito, L Cocchi, LL Gollo… - Neuroimage, 2016 - Elsevier
Connectomes with high sensitivity and high specificity are unattainable with current axonal
fiber reconstruction methods, particularly at the macro-scale afforded by magnetic …

[HTML][HTML] Mathematical framework for large-scale brain network modeling in The Virtual Brain

P Sanz-Leon, SA Knock, A Spiegler, VK Jirsa - Neuroimage, 2015 - Elsevier
In this article, we describe the mathematical framework of the computational model at the
core of the tool The Virtual Brain (TVB), designed to simulate collective whole brain …

Networks of anatomical covariance

AC Evans - Neuroimage, 2013 - Elsevier
Functional imaging or diffusion-weighted imaging techniques are widely used to understand
brain connectivity at the systems level and its relation to normal neurodevelopment …