Inference of Population Genetic Structure and High Linkage Disequilibrium Among Alternaria spp. Collected from Tomato and Potato Using Genotyping by …
TB Adhikari, BJ Knaus, NJ Grünwald, D Halterman… - bioRxiv, 2019 - biorxiv.org
Genotyping by sequencing (GBS) is considered a powerful tool to discover single nucleotide
polymorphisms (SNPs), which are useful to characterize closely related genomes of plant …
polymorphisms (SNPs), which are useful to characterize closely related genomes of plant …
Root rot and wilting complex of red raspberry: Pathogen characterization, identifying host resistance and sustainable management options
S Sapkota - 2023 - summit.sfu.ca
Root rot and wilting complex (RRWC) of red raspberry, caused by Phytophthora rubi and
potentially other species of Phytophthora, is an economically important disease in British …
potentially other species of Phytophthora, is an economically important disease in British …
Phylogeography and Evolution of Effector Genes in Phytophthora Species
SK Shakya - 2019 - ir.library.oregonstate.edu
Plant pathogens in the genus Phytophthora are known to cause disease on field crops,
nursery plants, and forest trees. The best known example probably is Phytophthora …
nursery plants, and forest trees. The best known example probably is Phytophthora …
[HTML][HTML] GBS analysis
This tutorial focuses on large SNP data sets such as those obtained from genotyping-by-
sequencing (GBS) for population genetic analysis in R. GBS is one of several techniques …
sequencing (GBS) for population genetic analysis in R. GBS is one of several techniques …
[PDF][PDF] Application of Target Enrichment Sequencing for Population Genetic Analyses of the Obligate Plant
Technological advances in genome sequencing have improved our ability to catalog
genomic variation and have led to an expansion of the scope and scale of genetic studies …
genomic variation and have led to an expansion of the scope and scale of genetic studies …
[PDF][PDF] AHDB Horticulture STANDARD RESEARCH REPORT
H Duncalfe - ctp-fcr.org
Background Root rot of the European red raspberry (Rubus idaeus), caused by a yet-
unknown consortium of Phytophthora species, is a recurring and destructive disease of this …
unknown consortium of Phytophthora species, is a recurring and destructive disease of this …
[HTML][HTML] Data sets used in this primer
VCF Reading - grunwaldlab.github.io
This data is for a population of the diploid plant pathogen Aphanomyces euteiches using
AFLP as a marker system (Grünwald & Hoheisel, 2006). A total of 187 pathogen isolates …
AFLP as a marker system (Grünwald & Hoheisel, 2006). A total of 187 pathogen isolates …
[PDF][PDF] From genomes to forest management–tackling invasive Phytophthora species in the era of genomics
GGM GOMEZ-GOLLEGO, JFTJF TABIMA, RR LenzR… - 2019 - academia.edu
Species of Phytophthora pose one of the most serious biosecurity threats to forest
ecosystems worldwide. Despite management efforts and increased awareness of forest …
ecosystems worldwide. Despite management efforts and increased awareness of forest …