[HTML][HTML] Considerations for diagnostic COVID-19 tests

O Vandenberg, D Martiny, O Rochas… - Nature Reviews …, 2021 - nature.com
During the early phase of the coronavirus disease 2019 (COVID-19) pandemic, design,
development, validation, verification and implementation of diagnostic tests were actively …

[HTML][HTML] Current challenges to virus discovery by meta-transcriptomics

JCA Cobbin, J Charon, E Harvey, EC Holmes… - Current opinion in …, 2021 - Elsevier
Meta-transcriptomic next-generation sequencing has transformed virus discovery,
dramatically expanding our knowledge of the known virosphere. Nevertheless, the use of …

[HTML][HTML] Metavirome of 31 tick species provides a compendium of 1,801 RNA virus genomes

XB Ni, XM Cui, JY Liu, RZ Ye, YQ Wu, JF Jiang… - Nature …, 2023 - nature.com
The increasing prevalence and expanding distribution of tick-borne viruses globally have
raised health concerns, but the full repertoire of the tick virome has not been assessed. We …

[HTML][HTML] Discovery of several thousand highly diverse circular DNA viruses

MJ Tisza, DV Pastrana, NL Welch, B Stewart, A Peretti… - elife, 2020 - elifesciences.org
Although millions of distinct virus species likely exist, only approximately 9000 are
catalogued in GenBank's RefSeq database. We selectively enriched for the genomes of …

Is there a brain microbiome?

CD Link - Neuroscience insights, 2021 - journals.sagepub.com
Numerous studies have identified microbial sequences or epitopes in pathological and non-
pathological human brain samples. It has not been resolved if these observations are …

[HTML][HTML] Opportunities and challenges of data-driven virus discovery

C Lauber, S Seitz - Biomolecules, 2022 - mdpi.com
Virus discovery has been fueled by new technologies ever since the first viruses were
discovered at the end of the 19th century. Starting with mechanical devices that provided …

[HTML][HTML] Recommendations for the introduction of metagenomic high-throughput sequencing in clinical virology, part I: Wet lab procedure

FX López-Labrador, JR Brown, N Fischer… - Journal of Clinical …, 2021 - Elsevier
Metagenomic high-throughput sequencing (mHTS) is a hypothesis-free, universal pathogen
detection technique for determination of the DNA/RNA sequences in a variety of sample …

Facilitating the adoption of high‐throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step‐by‐step description

B Lebas, I Adams, M Al Rwahnih, S Baeyen… - EPPO …, 2022 - Wiley Online Library
High‐throughput sequencing (HTS) is a powerful tool that enables the simultaneous
detection and potential identification of any organisms present in a sample. The growing …

Sustained RNA virome diversity in Antarctic penguins and their ticks

M Wille, E Harvey, M Shi, D Gonzalez-Acuña… - The ISME …, 2020 - academic.oup.com
Despite its isolation and extreme climate, Antarctica is home to diverse fauna and
associated microorganisms. It has been proposed that the most iconic Antarctic animal, the …

[HTML][HTML] Deep viral blood metagenomics reveals extensive anellovirus diversity in healthy humans

M Cebriá-Mendoza, C Arbona, L Larrea, W Díaz… - Scientific Reports, 2021 - nature.com
Human blood metagenomics has revealed the presence of different types of viruses in
apparently healthy subjects. By far, anelloviruses constitute the viral family that is more …