[HTML][HTML] Natural products for drug discovery in the 21st century: innovations for novel drug discovery

NE Thomford, DA Senthebane, A Rowe… - International journal of …, 2018 - mdpi.com
The therapeutic properties of plants have been recognised since time immemorial. Many
pathological conditions have been treated using plant-derived medicines. These medicines …

[HTML][HTML] Bioinformatics methods for mass spectrometry-based proteomics data analysis

C Chen, J Hou, JJ Tanner, J Cheng - International journal of molecular …, 2020 - mdpi.com
Recent advances in mass spectrometry (MS)-based proteomics have enabled tremendous
progress in the understanding of cellular mechanisms, disease progression, and the …

Quantitative proteomics identifies the core proteome of exosomes with syntenin-1 as the highest abundant protein and a putative universal biomarker

FG Kugeratski, K Hodge, S Lilla, KM McAndrews… - Nature cell …, 2021 - nature.com
Exosomes are extracellular vesicles derived from the endosomal compartment that are
potentially involved in intercellular communication. Here, we found that frequently used …

A palmitate-rich metastatic niche enables metastasis growth via p65 acetylation resulting in pro-metastatic NF-κB signaling

P Altea-Manzano, G Doglioni, Y Liu, AM Cuadros… - Nature cancer, 2023 - nature.com
Metabolic rewiring is often considered an adaptive pressure limiting metastasis formation;
however, some nutrients available at distant organs may inherently promote metastatic …

The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3

CA McHugh, CK Chen, A Chow, CF Surka, C Tran… - Nature, 2015 - nature.com
Many long non-coding RNAs (lncRNAs) affect gene expression, but the mechanisms by
which they act are still largely unknown. One of the best-studied lncRNAs is Xist, which is …

[HTML][HTML] Microbial biodiversity and bioremediation assessment through omics approaches

H Chandran, M Meena, K Sharma - Frontiers in Environmental …, 2020 - frontiersin.org
Industrialization, population burst, and changing lifestyles have resulted in the genesis of
non-degradable pollutants languishing the environment and human health. Biological …

[HTML][HTML] Chemical proteomics approaches for identifying the cellular targets of natural products

MH Wright, SA Sieber - Natural product reports, 2016 - pubs.rsc.org
Covering: 2010 up to 2016 Deconvoluting the mode of action of natural products and drugs
remains one of the biggest challenges in chemistry and biology today. Chemical proteomics …

Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present

M Bantscheff, S Lemeer, MM Savitski… - Analytical and bioanalytical …, 2012 - Springer
Mass-spectrometry-based proteomics is continuing to make major contributions to the
discovery of fundamental biological processes and, more recently, has also developed into …

[HTML][HTML] Serine ADP-ribosylation reversal by the hydrolase ARH3

P Fontana, JJ Bonfiglio, L Palazzo, E Bartlett, I Matic… - Elife, 2017 - elifesciences.org
ADP-ribosylation (ADPr) is a posttranslational modification (PTM) of proteins that controls
many cellular processes, including DNA repair, transcription, chromatin regulation and …

Quantitative proteomics using SILAC: Principles, applications, and developments

X Chen, S Wei, Y Ji, X Guo, F Yang - Proteomics, 2015 - Wiley Online Library
SILAC is based on direct addition of selected stable isotope amino acids into the cell culture
medium, allowing superior quantitative analysis of the cellular proteome compared to other …